New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 1 | 21717 = | 24 (0.360) | 35 (0.530) | 28/200 | 2.1 | 74.5% | intergenic (–/–) | –/– | –/– |
? | 182 | = 6967 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
CATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/21815‑21717 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCCTCATTTGCAATAATCCGAAAAAATGTGAAGTGCCTCGCCGTTTCCACATCTCGC < 182/6967‑6868 CATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGC < 2:708437/101‑1 CGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTA < 2:952753/101‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTAT > 2:1663490/1‑101 ATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCA < 1:155927/101‑1 TGCGGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCAT < 2:36533/101‑1 GGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCAC < 2:692051/101‑1 GGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCAC < 2:496952/101‑1 GGCGTGAACGACTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCAC < 2:1381260/101‑1 GTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCT > 1:832591/1‑101 aGAACGCCTTATCGGGCCTACAAAGTAAAGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTG > 2:418584/2‑101 TGAACGCCTTATCCGCCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTG > 1:1440493/1‑101 GAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGA < 2:72810/101‑1 AACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAA < 1:1602710/101‑1 ACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAA < 2:589834/101‑1 GCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACC < 1:986664/101‑1 CCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCG > 1:1119953/1‑101 CCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCG > 2:214427/1‑101 TTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGG < 1:842097/101‑1 TTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGG < 2:671048/101‑1 ATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGA > 1:737487/1‑101 ATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGA > 1:313198/1‑101 TCCGGCCTACAAAGTAATGCTCATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAA < 2:48941/101‑1 GCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCC > 1:1204664/1‑101 CTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGG > 2:47164/1‑101 AAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTT < 2:1388483/101‑1 AAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTT < 2:60827/101‑1 ATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATC > 1:467594/1‑101 TGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCC < 2:14863/101‑1 TGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCC > 1:126596/1‑101 CATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCCTCAT > 2:532919/1‑101 ATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCCTCATT < 1:227482/101‑1 CAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCCTCATTTGCAAT > 2:258063/1‑101 AAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCCTCATTTGCAATA < 1:1397366/101‑1 TTTGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCCTCATTTGCAATAATCCGAAAAAATGTGAAGTGCCTCGCCGTTTCCACATCTC > 2:225804/1‑101 TGCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCCTCATTTGCAATAATCCGAAAAAATGTGAAGTGCCTCGCCGTTTCCACATCTCGC < 1:682132/101‑1 CATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTAATGCACATATTGCAAGGAAATGTAGGCCTGATAAGCGTAGCGCATCAGGCTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/21815‑21717 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTTTTATCATCACTCTGAAACCGGGGAAACCCGGTTTTTTTATCCTCATTTGCAATAATCCGAAAAAATGTGAAGTGCCTCGCCGTTTCCACATCTCGC < 182/6967‑6868 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |