| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 547,700 | Δ8,125 bp | IS1‑mediated | [nmpC]–[ECB_00513] | [nmpC], ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 546987–547698 | 555824 | 8127–8838 | 22 [20] | [0] 65 | [insB‑6]–[ECB_00513] | [insB‑6],insA‑6,nmpC,ybcR,ybcS,ybcT,ybcU,ECB_00510,nohB,ECB_00512,[ECB_00513] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 547699 | NA (NA) | 64 (0.990) | 48/200 | 0.3 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 555825 = | 0 (0.000) | coding (1110/2346 nt) | ECB_00513 | conserved hypothetical protein | |||||
AAGCAAGTGAGGATGCAGCCAGAGAGTATGCAAGCCAGGCAGCAGAGCCGTATAAATATGTCTTACAGCCACTGCCTGATGTGTGGATACCGTTTAACGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGCTTCA > REL606/555728‑555925 | agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGAt > 2:738043‑M2/98‑101 (MQ=255)agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGAt > 1:920244‑M2/98‑101 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCa < 2:1332704‑M2/7‑1 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCa < 2:1534143‑M2/7‑1 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCAc < 2:920239‑M2/8‑1 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTg < 2:1239774‑M2/10‑1 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTgg < 1:1344476‑M2/11‑1 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGata < 2:420566‑M2/14‑1 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGata > 1:699511‑M2/88‑101 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATAtgcttgct > 1:1153778‑M2/80‑101 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATAtgcttgct > 1:1221607‑M2/80‑101 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTg > 2:1714075‑M2/79‑101 (MQ=255) agatgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTgg > 1:985876‑M2/78‑101 (MQ=255) tgatagaaacaaaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCtt > 2:1578106‑M2/75‑101 (MQ=255) ntagaaacagaagccactggagcacctcaanaaaaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCtttt > 1:256711‑M2/73‑101 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGcc > 2:1571270‑M2/69‑101 (MQ=255) aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTAGCTTTTCGCCt > 1:1134750‑M2/68‑101 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTg < 2:996050‑M2/35‑1 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTg > 2:147148‑M2/67‑101 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGt > 2:413369‑M2/65‑101 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagaatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTta > 1:1141293‑M2/63‑101 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTtata < 2:1598260‑M2/41‑1 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATaa < 2:1527025‑M2/42‑1 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATaa < 1:219043‑M2/42‑1 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATaa < 2:539882‑M2/42‑1 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATaa < 2:1430616‑M2/42‑1 (MQ=255) actggagcacctcaaaaacaccatcttacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGc > 1:770797‑M2/58‑101 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGc > 1:1457685‑M2/58‑101 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCa > 1:114326‑M2/57‑101 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCa < 2:4149‑M2/45‑1 (MQ=255) acctcaaaaacaccatcatacactaactcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAAcc < 1:297898‑M2/52‑1 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAAcc < 2:1034887‑M2/52‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCg > 1:685115‑M2/49‑101 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGt < 2:985871‑M2/54‑1 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGt > 2:1553481‑M2/48‑101 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAg > 1:846620‑M2/46‑101 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAg > 1:478123‑M2/46‑101 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAgg > 2:857519‑M2/45‑101 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAgg > 2:1640747‑M2/45‑101 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGtg > 1:862808‑M2/43‑101 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGtga > 1:984974‑M2/42‑101 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGtgatg > 1:684188‑M2/40‑101 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTgatgat > 2:723440‑M2/38‑101 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGt > 1:1695647‑M2/36‑101 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGtt > 1:516791‑M2/35‑101 (MQ=255) atacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGttat < 2:257051‑M2/69‑1 (MQ=255) atacactaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGttat > 1:729115‑M2/33‑101 (MQ=255) actaaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTaaa < 1:205613‑M2/73‑1 (MQ=255) taaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAAt < 2:1314667‑M2/75‑1 (MQ=255) aaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATg < 2:1392172‑M2/76‑1 (MQ=255) aaatcagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATg < 2:1221602‑M2/76‑1 (MQ=255) cagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCAt < 2:226028‑M2/80‑1 (MQ=255) cagtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCAt < 1:1073534‑M2/80‑1 (MQ=255) agtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATc > 1:1347984‑M2/21‑101 (MQ=255) agtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATc < 1:1571276‑M2/81‑1 (MQ=255) agtaagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATc < 1:1455069‑M2/81‑1 (MQ=255) aagttggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGa > 2:57178‑M2/18‑101 (MQ=255) tggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAg < 1:1705216‑M2/88‑1 (MQ=255) tggcagcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAg > 1:1149792‑M2/14‑101 (MQ=255) agcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGgttg > 2:1412208‑M2/10‑101 (MQ=255) gcatcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGgttgt < 1:1672786‑M2/93‑1 (MQ=255) tcaccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAg < 1:597518‑M2/96‑1 (MQ=255) ccccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGc < 2:685110‑M2/97‑1 (MQ=255) ccCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGCtt > 2:1614438‑M2/3‑101 (MQ=255) cGATTCACTGGCTATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGCTTCa > 2:204724/1‑101 (MQ=17) | AAGCAAGTGAGGATGCAGCCAGAGAGTATGCAAGCCAGGCAGCAGAGCCGTATAAATATGTCTTACAGCCACTGCCTGATGTGTGGATACCGTTTAACGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGCTTCA > REL606/555728‑555925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |