| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 547,700 | Δ8,125 bp | IS1‑mediated | [nmpC]–[ECB_00513] | [nmpC], ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 546987–547698 | 555824 | 8127–8838 | 22 [20] | [0] 65 | [insB‑6]–[ECB_00513] | [insB‑6],insA‑6,nmpC,ybcR,ybcS,ybcT,ybcU,ECB_00510,nohB,ECB_00512,[ECB_00513] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 547699 | NA (NA) | 64 (0.990) | 48/200 | 0.3 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 555825 = | 0 (0.000) | coding (1110/2346 nt) | ECB_00513 | conserved hypothetical protein | |||||
AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/547603‑547699‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGCTT > REL606/555825‑555923 AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGAT > 2:738043/1‑101AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGAT > 1:920244/1‑101 AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCA < 2:1332704/101‑1 AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCA < 2:1534143/101‑1 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCAC < 2:920239/101‑1 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTG < 2:1239774/101‑1 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGG < 1:1344476/101‑1 CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATA < 2:420566/101‑1 CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATA > 1:699511/1‑101 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCT > 1:1153778/1‑101 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCT > 1:1221607/1‑101 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTG > 2:1714075/1‑101 agaTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGG > 1:985876/4‑101 TGATAGAAACAAAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTT > 2:1578106/1‑101 nTAGAAACAGAAGCCACTGGAGCACCTCAANAAAACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTT > 1:256711/2‑101 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCC > 2:1571270/1‑101 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTAGCTTTTCGCCT > 1:1134750/1‑101 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTG < 2:996050/101‑1 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTG > 2:147148/1‑101 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGT > 2:413369/1‑101 AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGAATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTA > 1:1141293/1‑101 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATA < 2:1598260/101‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAA < 2:1527025/101‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAA < 1:219043/101‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAA < 2:539882/101‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAA < 2:1430616/101‑1 ACTGGAGCACCTCAAAAACACCATCTTACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGC > 1:770797/1‑101 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGC > 1:1457685/1‑101 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCA > 1:114326/1‑101 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCA < 2:4149/101‑1 ACCTCAAAAACACCATCATACACTAACTCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACC < 1:297898/101‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACC < 2:1034887/101‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCG > 1:685115/1‑101 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGT < 2:985871/101‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGT > 2:1553481/1‑101 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAG > 1:846620/1‑101 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAG > 1:478123/1‑101 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGG > 2:857519/1‑101 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGG > 2:1640747/1‑101 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTG > 1:862808/1‑101 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGA > 1:984974/1‑101 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATG > 1:684188/1‑101 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGAT > 2:723440/1‑101 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGT > 1:1695647/1‑101 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTT > 1:516791/1‑101 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTAT < 2:257051/101‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTAT > 1:729115/1‑101 ACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAA < 1:205613/101‑1 TAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAAT < 2:1314667/101‑1 AAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATG < 2:1392172/101‑1 AAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATG < 2:1221602/101‑1 CAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCAT < 2:226028/101‑1 CAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCAT < 1:1073534/101‑1 AGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATC < 1:1455069/101‑1 AGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATC < 1:1571276/101‑1 AGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATC > 1:1347984/1‑101 AAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGA > 2:57178/1‑101 TGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAG > 1:1149792/1‑101 TGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAG < 1:1705216/101‑1 AGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTG > 2:1412208/1‑101 GCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGT < 1:1672786/101‑1 TCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAG < 1:597518/101‑1 ccCCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGC < 2:685110/99‑1 CCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGCTT > 2:1614438/1‑101 AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/547603‑547699‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAACCGTAGGTGATGATGTTATTAAAATGCCATCCGATAAGGTTGTTAGCTT > REL606/555825‑555923 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |