Predicted mutation
evidence seq id position mutation annotation gene description
MC JC REL606 4,275,717 57510 bp→GTACA [yjcO][lysU] 52 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 4275717 4333226 57510 88 [2] [1] 88 [yjcO]–[lysU] [yjcO],fdhF,yjcP,yjcQ,yjcR,yjcS,alsK,alsE,alsC,alsA,alsB,rpiR,rpiB,yjdP,phnP,phnO,phnN,phnM,phnL,phnK,phnJ,phnI,phnH,phnG,phnF,phnE,phnD,phnC,phnB,phnA,yjdA,yjcZ,proP,basS,basR,yjdB,yjdE,adiY,adiA,melR,melA,melB,yjdF,fumB,dcuB,dcuR,dcuS,dcuS,yjdI,yjdJ,yjdK,[lysU]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 42757162 (0.030)83 (1.360)
+GTACA
65/190 0.0 98.3% coding (232/690 nt) yjcO hypothetical protein
?REL606 4333227 = 1 (0.020)coding (211/1518 nt) lysU lysine tRNA synthetase, inducible

ATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAG  >  REL606/4275616‑4275816
                                                                                                    |                                                                                                    
atatGCGCCAGCGTTACTTCATCTTCTTTACTGCCCGCTTGCGCCGCTTTCCCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGAt                                                                                                      <  1:732021/101‑1 (MQ=255)
atatGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGAt                                                                                                      >  2:161951/1‑101 (MQ=255)
    gcgcCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtac                                                                                                  <  2:1097798‑M1/101‑5 (MQ=255)
      gcCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacac                                                                                                <  2:478959‑M1/101‑7 (MQ=255)
      gcCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacac                                                                                                >  2:1454257‑M1/1‑95 (MQ=255)
        cAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaa                                                                                              >  2:1344621‑M1/1‑93 (MQ=255)
        cAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCCGATTGGTGATgtacacaa                                                                                              >  1:247133‑M1/1‑93 (MQ=255)
         aGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaac                                                                                             >  2:731081‑M1/1‑92 (MQ=255)
            gTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccga                                                                                          >  2:55516‑M1/1‑89 (MQ=255)
            gTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccga                                                                                          >  1:233575‑M1/1‑89 (MQ=255)
             ttACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgag                                                                                         <  1:1611485‑M1/101‑14 (MQ=255)
              tACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGGTgtacacaaccggga                                                                                        >  2:842011‑M1/1‑87 (MQ=255)
               tctTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagac                                                                                       <  2:490923‑M1/100‑16 (MQ=255)
               aCTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagac                                                                                       >  2:995580‑M1/1‑86 (MQ=255)
               aCTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagac                                                                                       >  1:1204882‑M1/1‑86 (MQ=255)
                cTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagact                                                                                      >  1:1589108‑M1/1‑85 (MQ=255)
                cTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagact                                                                                      >  1:1312611‑M1/1‑85 (MQ=255)
                 ttCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagactt                                                                                     >  1:411984‑M1/1‑84 (MQ=255)
                  tCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttc                                                                                    >  2:72346‑M1/1‑83 (MQ=255)
                    ccctTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaa                                                                                  <  2:354718‑M1/100‑21 (MQ=255)
                    aCCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaa                                                                                  >  1:1351245‑M1/1‑81 (MQ=255)
                      cttcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatg                                                                                >  2:1016606‑M1/1‑79 (MQ=255)
                      cttcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatg                                                                                >  2:369584‑M1/1‑79 (MQ=255)
                       ttcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAgcgcgc                                                                               >  1:1339973/1‑101 (MQ=255)
                        tcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtt                                                                              <  2:511410‑M1/101‑25 (MQ=255)
                        tcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtt                                                                              <  2:590690‑M1/101‑25 (MQ=255)
                         cttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgttt                                                                             >  1:1061164‑M1/1‑76 (MQ=255)
                          tttACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgttta                                                                            <  1:1172556‑M1/101‑27 (MQ=255)
                          tttACTACCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgttta                                                                            <  1:1050242‑M1/101‑27 (MQ=255)
                           ttACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcactgtttaa                                                                           <  1:1043214‑M1/101‑28 (MQ=255)
                           ttACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaa                                                                           <  1:1248143‑M1/101‑28 (MQ=255)
                           ttACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaa                                                                           <  2:79407‑M1/101‑28 (MQ=255)
                              cTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaagga                                                                        >  2:359241‑M1/1‑71 (MQ=255)
                              cTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaacgagacttcaatgtttaagga                                                                        >  1:1326414‑M1/1‑71 (MQ=255)
                                 cccGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattc                                                                     >  2:818307‑M1/1‑68 (MQ=255)
                                     cTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagt                                                                 <  1:1355972‑M1/101‑38 (MQ=255)
                                      ttGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagtt                                                                <  1:868927‑M1/101‑39 (MQ=255)
                                        gcgcCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcc                                                              <  2:879248‑M1/101‑41 (MQ=255)
                                          gccgcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctg                                                            <  1:1515415‑M1/101‑43 (MQ=255)
                                           ccgcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattcccgttcctgg                                                           >  2:131773‑M1/1‑58 (MQ=255)
                                           ccgcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctgg                                                           <  2:996114‑M1/101‑44 (MQ=255)
                                           ccgcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctgg                                                           >  1:184685‑M1/1‑58 (MQ=255)
                                             gcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggtt                                                         >  1:1714206‑M1/1‑56 (MQ=255)
                                             gcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTc                                                         <  2:1339967/101‑1 (MQ=255)
                                              cTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggtta                                                        >  1:825873‑M1/1‑55 (MQ=255)
                                              cTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggtta                                                        <  2:938805‑M1/101‑47 (MQ=255)
                                               tttCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttat                                                       <  1:983194‑M1/101‑48 (MQ=255)
                                               tttCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttat                                                       <  2:570708‑M1/101‑48 (MQ=255)
                                               tttCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttat                                                       >  1:941698‑M1/1‑54 (MQ=255)
                                                  ctctGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatcct                                                    <  2:1084295‑M1/101‑51 (MQ=255)
                                                  ctctGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatcct                                                    >  2:1573703‑M1/1‑51 (MQ=255)
                                                  ctctGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatcct                                                    >  2:1092938‑M1/1‑51 (MQ=255)
                                                   tctGCAAGAACTTTTGCTTTTGGATAGTCCAGACTGACCTGATTGGTGATgtacacaaccgagacttcaatttttaaggattccagttcctggttatcctt                                                   <  2:1705551‑M1/101‑52 (MQ=255)
                                                    ctGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttc                                                  <  2:139761‑M1/101‑53 (MQ=255)
                                                     tGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTTGTGATgtacacaaccgagacttcaatgcttaaggattccagctcctggttctccttca                                                 >  1:480682‑M1/1‑48 (MQ=255)
                                                     tGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcg                                                 <  2:479431‑M1/101‑54 (MQ=255)
                                                       cAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgca                                               >  2:916062‑M1/1‑46 (MQ=255)
                                                         aGAACTTTTGCTTGTGGATAGGCCAGACTGACCGGATTGGTGGTgtacacaaccgagacttcaatgtttaaggattccagttcctggttattcatcgcatc                                             >  2:1536051‑M1/1‑44 (MQ=255)
                                                          gAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatca                                            <  2:1011782‑M1/101‑59 (MQ=255)
                                                          gAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatca                                            <  1:1350523‑M1/101‑59 (MQ=255)
                                                              ttttGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaact                                        <  1:19768‑M1/101‑63 (MQ=255)
                                                               tttGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactc                                       >  2:1099435‑M1/1‑38 (MQ=255)
                                                               tttGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactc                                       <  2:1589102‑M1/101‑64 (MQ=255)
                                                               tttGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactc                                       >  2:78007‑M1/1‑38 (MQ=255)
                                                                  gCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttc                                    <  1:1546130‑M1/101‑67 (MQ=255)
                                                                   cTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcg                                   <  1:869876‑M1/101‑68 (MQ=255)
                                                                   cTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcg                                   >  2:761088‑M1/1‑34 (MQ=255)
                                                                    ttGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgt                                  <  1:369584‑M1/101‑69 (MQ=255)
                                                                     tgtgGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtg                                 >  2:950460‑M1/1‑32 (MQ=255)
                                                                      gtgGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgc                                >  1:735626‑M1/1‑31 (MQ=255)
                                                                          aTAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaact                            >  1:1139758‑M1/1‑27 (MQ=255)
                                                                          aTAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaact                            >  1:1192051‑M1/1‑27 (MQ=255)
                                                                                cAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcag                      >  2:1479060‑M1/1‑21 (MQ=255)
                                                                                cAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcag                      <  1:56265‑M1/101‑81 (MQ=255)
                                                                                cAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcag                      <  2:1071909‑M1/101‑81 (MQ=255)
                                                                                cAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcag                      >  2:438103‑M1/1‑21 (MQ=255)
                                                                                  gACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagag                    <  1:961374‑M1/101‑83 (MQ=255)
                                                                                   aCTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagagg                   >  1:782822‑M1/1‑18 (MQ=255)
                                                                                    cTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggt                  >  1:1440411‑M1/1‑17 (MQ=255)
                                                                                       aCCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatg               >  2:27770‑M1/1‑14 (MQ=255)
                                                                                         cGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggt             <  1:1123350‑M1/101‑90 (MQ=255)
                                                                                          ggATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtc            >  1:129327‑M1/1‑11 (MQ=255)
                                                                                          ggATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtc            <  1:358828‑M1/101‑91 (MQ=255)
                                                                                           gATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtcg           <  2:411979‑M1/101‑92 (MQ=255)
                                                                                              tGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgaaaatgatcagaggtatggtcgcgg        >  2:436394‑M1/1‑7 (MQ=255)
                                                                                                 tGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtcgcggcga     >  1:1328318‑M1/1‑4 (MQ=255)
                                                                                                   aTgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtcgcggcgaaa   >  1:790887‑M1/1‑2 (MQ=255)
                                                                                                    tgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtcgcggcgaaaa  <  1:818312‑M1/101‑101 (MQ=255)
                                                                                                    |                                                                                                    
ATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAG  >  REL606/4275616‑4275816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: