| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2103888 = | 16 (0.250) | 11 (0.290) +GCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGG |
9/118 | 3.2 | 47.0% | coding (155/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | = 2103918 | 26 (0.400) | coding (185/216 nt) | ECB_01992 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGTTTTAACAAC > REL606/2103821‑2104018 | cTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccagcca < 1:179788/101‑4 (MQ=255)cTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccagcca > 1:1268249/1‑98 (MQ=255) ataCAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccagccagc > 1:618914/1‑96 (MQ=255) aCAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccagccagcca < 1:1215902/101‑8 (MQ=255) agccagccagccagccagccagccagccagccagcCAGGTGTGAATGGGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTa > 1:451939/8‑101 (MQ=255) cagccagccagccagccagccagccagccagcCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTaaaa > 2:1175639/5‑101 (MQ=255) cagccagccagccagccagccagccagccagcCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTaaaa > 2:1175638/5‑101 (MQ=255) cagccagccagccagccagccagccagccagcCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTaaaa > 1:136185/5‑101 (MQ=255) gccggccagccagccagccagccagccagccaGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTaaaaaa < 2:1568376/97‑1 (MQ=255) gtaaatcagccggccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGaaa < 2:1114518/95‑1 (MQ=255) ccagccagccagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGaaaa < 2:10613/101‑1 (MQ=255) cagccagccagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAAc < 1:221267/101‑1 (MQ=255) gccagccagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTTCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACAt > 1:811608/1‑101 (MQ=255) gccagccagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACAt < 2:1609487/101‑1 (MQ=255) gccagccagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACAt < 2:549587/101‑1 (MQ=255) agccagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTc > 2:798231/1‑101 (MQ=255) ccagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCAt < 2:1268244/101‑1 (MQ=255) cagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCAtc > 2:823730/1‑101 (MQ=255) ccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCAtcttc > 2:1359627/1‑101 (MQ=255) gccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTctgc < 1:113636/101‑1 (MQ=255) ccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTctgct > 2:846567/1‑101 (MQ=255) ccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTctgct > 1:1702590/1‑101 (MQ=255) agccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGt < 1:953655/101‑1 (MQ=255) gccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGtt > 1:353703/1‑101 (MQ=255) ccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGttt > 1:598652/1‑101 (MQ=255) cagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGTTTTaaca < 1:802209/101‑1 (MQ=255) ggTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGTTTTaacaac > 2:1242837/1‑101 (MQ=255) ggTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGTTTTaacaac > 2:261791/1‑101 (MQ=255) ggTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGTTTTaacaac > 2:1516846/1‑101 (MQ=255) ggTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGTTTTaacaac > 2:881831/1‑101 (MQ=255) | CTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAAAAGAAAACATTTCATCTTCTGCTGTTTTAACAAC > REL606/2103821‑2104018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |