| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2103888 = | 16 (0.250) | 11 (0.290) +GCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGG |
9/118 | 3.2 | 47.0% | coding (155/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | = 2103918 | 26 (0.400) | coding (185/216 nt) | ECB_01992 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ACAACACTACGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAA > REL606/2103788‑2103984 | acaacaCTACGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTcac < 2:988948/101‑1 (MQ=255) caacaCTACGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTcaca > 1:304529/1‑101 (MQ=255) aacaCTACGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcag < 1:287080/101‑1 (MQ=255) acacTACGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagc < 1:177927/101‑1 (MQ=255) tACGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagc < 2:494945/101‑1 (MQ=255) aCGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagcc > 1:631522/1‑101 (MQ=255) cGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagcca < 2:1681747/101‑1 (MQ=255) tGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagc > 1:464037/1‑101 (MQ=255) aTCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccag < 2:304529/101‑1 (MQ=255) cAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcc < 1:450949/101‑1 (MQ=255) aaaaaaCATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccag > 1:681510/1‑101 (MQ=255) aaaCATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagcca > 1:622472/1‑101 (MQ=255) cTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccagcca < 1:179788/101‑4 (MQ=255) cTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccagcca > 1:1268249/1‑98 (MQ=255) ataCAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccagccagc > 1:618914/1‑96 (MQ=255) aCAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccagccagcca < 1:1215902/101‑8 (MQ=255) agccagccagccagccagccagccagccagccagcCAGGTGTGAATGGGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTa > 1:451939/8‑101 (MQ=255) cagccagccagccagccagccagccagccagcCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTaaaa > 2:1175639/5‑101 (MQ=255) cagccagccagccagccagccagccagccagcCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTaaaa > 2:1175638/5‑101 (MQ=255) cagccagccagccagccagccagccagccagcCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTaaaa > 1:136185/5‑101 (MQ=255) | ACAACACTACGTGACCACATCAAAAAAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACTATAAAAGGCAACACTAAAA > REL606/2103788‑2103984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |