Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 3,841,192 IS150 (+) +3 bp coding (389‑391/1074 nt) recF ← recombination protein F

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3841192 =0 (0.000)78 (1.210) 58/200 0.1 100% coding (391/1074 nt) recF recombination protein F
?REL606 = 3894996 NA (NA)noncoding (1443/1443 nt) IS150 repeat region
* ? REL606 = 38411940 (0.000)95 (1.510) 66/196 0.0 100% coding (389/1074 nt) recF recombination protein F
?REL606 3893554 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

Only 100 of 180 total aligned reads displayed.

CGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGTCGAT  >  REL606/3841094‑3841294
                                                                                                    |                                                                                                    
 gaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAttt                                                                                                     >  1:141847‑M1/98‑101 (MQ=255)
   aTTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgt                                                                                                   >  2:869555‑M1/1‑98 (MQ=255)
   aTTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgt                                                                                                   >  1:1100777‑M1/1‑98 (MQ=255)
     tGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtac                                                                                                 >  1:1253298‑M1/1‑96 (MQ=255)
         ctgctTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgca                                                                                             <  1:1117780‑M1/101‑10 (MQ=255)
         ctgctTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgca                                                                                             >  1:280644‑M1/1‑92 (MQ=255)
            ctTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcaccc                                                                                          >  1:1477953‑M1/1‑89 (MQ=255)
             aattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGtt                                                                                         <  1:1495137‑M1/16‑1 (MQ=255)
              attaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTg                                                                                        <  1:179793‑M1/17‑1 (MQ=255)
                aGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattt                                                                                      <  1:318905‑M1/101‑17 (MQ=255)
                 gCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatttt                                                                                     <  1:1669792‑M1/101‑18 (MQ=255)
                 aaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagt                                                                                     >  1:790691‑M1/82‑101 (MQ=255)
                   aaTCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgt                                                                                   >  1:1333429‑M1/1‑82 (MQ=255)
                     tCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttg                                                                                 <  2:376468‑M1/101‑22 (MQ=255)
                      cGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttgga                                                                               <  2:980066‑M1/101‑24 (MQ=255)
                       tctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGagtaaagta                                                                               >  1:65380‑M1/76‑101 (MQ=255)
                         tgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAgtaaagtaaa                                                                             >  1:554556‑M1/74‑101 (MQ=255)
                         tgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAgtaaagtaaa                                                                             >  2:1695539‑M1/74‑101 (MQ=255)
                          tGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacga                                                                            >  2:368891‑M1/1‑75 (MQ=255)
                          tGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacga                                                                            >  1:1565522‑M1/1‑75 (MQ=255)
                          gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAAc                                                                            >  1:872539‑M1/73‑101 (MQ=255)
                           gagaTTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgat                                                                           >  2:1005892‑M1/1‑74 (MQ=255)
                           actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAAcc                                                                           >  2:335402‑M1/72‑101 (MQ=255)
                           actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAAcc                                                                           >  2:791099‑M1/72‑101 (MQ=255)
                            ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAAccc                                                                          <  2:122796‑M1/31‑1 (MQ=255)
                             tccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCt                                                                         >  1:119886‑M1/70‑101 (MQ=255)
                              ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCtt                                                                        <  1:895698‑M1/33‑1 (MQ=255)
                                aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt                                                                      >  1:1276634‑M1/67‑101 (MQ=255)
                                aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt                                                                      <  1:233435‑M1/35‑1 (MQ=255)
                                aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCt                                                                      <  1:121554‑M1/35‑1 (MQ=255)
                                 gCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatg                                                                     <  1:670807‑M1/101‑34 (MQ=255)
                                 gCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatg                                                                     <  2:1407407‑M1/101‑34 (MQ=255)
                                 attgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg                                                                     <  2:1633319‑M1/36‑1 (MQ=255)
                                 attgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTg                                                                     >  1:1337204‑M1/66‑101 (MQ=255)
                                 attgaatatcggaatcagacctatatgcctcgtgtttaacggtccaactttttggggtcagtacaATTTGGGGCCTCTGTTGAGTAAAGTAAACCCTTCTg                                                                     >  2:1287601‑M1/66‑101 (MQ=255)
                                  cTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgg                                                                    >  1:960746‑M1/1‑67 (MQ=255)
                                  cTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatgg                                                                    >  2:1345892‑M1/1‑67 (MQ=255)
                                    ccAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaa                                                                  <  1:833107‑M1/101‑37 (MQ=255)
                                     cAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaat                                                                 <  1:941405‑M1/101‑38 (MQ=255)
                                      aGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaata                                                                >  2:698174‑M1/1‑63 (MQ=255)
                                        gCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagc                                                              <  1:1320260‑M1/101‑41 (MQ=255)
                                        atcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTAt                                                              <  1:1047508‑M1/43‑1 (MQ=255)
                                        atcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTAt                                                              <  1:1710169‑M1/43‑1 (MQ=255)
                                        atcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTAt                                                              <  2:1071290‑M1/43‑1 (MQ=255)
                                          cggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCa                                                            >  2:748196‑M1/57‑101 (MQ=255)
                                            tGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccct                                                          <  1:1042880‑M1/101‑45 (MQ=255)
                                             aatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACt                                                         <  1:441999‑M1/48‑1 (MQ=255)
                                              aaaaaTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa                                                        >  1:1367017‑M1/1‑55 (MQ=255)
                                               aaaaTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat                                                       <  1:1295602‑M1/101‑48 (MQ=255)
                                               aaaaTCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat                                                       >  1:949323‑M1/1‑54 (MQ=255)
                                                 agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCAt                                                     >  1:915918‑M1/50‑101 (MQ=255)
                                                   acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTg                                                   >  2:1562833‑M1/48‑101 (MQ=255)
                                                    cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTgg                                                  <  2:1087168‑M1/55‑1 (MQ=255)
                                                     ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGc                                                 <  2:1439141‑M1/56‑1 (MQ=255)
                                                      tatatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCa                                                >  1:1172314‑M1/45‑101 (MQ=255)
                                                       ggTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa                                               <  2:1500930‑M1/101‑56 (MQ=255)
                                                       atatgcctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCAt                                               >  2:829835‑M1/44‑101 (MQ=255)
                                                        gTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag                                              <  1:215333‑M1/101‑57 (MQ=255)
                                                          tCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc                                            <  2:177941‑M1/101‑59 (MQ=255)
                                                            cctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGt                                          >  2:1234973‑M1/39‑101 (MQ=255)
                                                             ctcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTg                                         <  1:804306‑M1/64‑1 (MQ=255)
                                                              tcgtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTgc                                        >  2:174131‑M1/37‑101 (MQ=255)
                                                               gtgAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat                                       <  2:1565516‑M1/101‑64 (MQ=255)
                                                                gtgtttaactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTgcgc                                      <  2:444934‑M1/67‑1 (MQ=255)
                                                                 gAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac                                     <  1:1437081‑M1/101‑66 (MQ=255)
                                                                 gAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccatttagttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac                                     >  2:1673858‑M1/1‑36 (MQ=255)
                                                                     taactgtccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGtt                                 >  1:122796‑M1/30‑101 (MQ=255)
                                                                       aTCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                               <  2:1201755‑M1/101‑72 (MQ=255)
                                                                       aTCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                               <  2:1100772‑M1/101‑72 (MQ=255)
                                                                       aTCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                               >  2:678083‑M1/1‑30 (MQ=255)
                                                                       aTCCCCAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                               >  1:1084215‑M1/1‑30 (MQ=255)
                                                                          cccAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa                            >  2:58395‑M1/1‑27 (MQ=255)
                                                                            ccaactttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGAc                          >  2:225974‑M1/23‑101 (MQ=255)
                                                                            cAGTCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa                          <  2:1606932‑M1/101‑77 (MQ=255)
                                                                               tCGAGGAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagca                       <  2:639390‑M1/101‑80 (MQ=255)
                                                                                 tttttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTAt                     >  1:1071295‑M1/18‑101 (MQ=255)
                                                                                   tttggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGGTCCGCGACCTTATGc                   >  2:1277047‑M1/16‑101 (MQ=255)
                                                                                   ggAATGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt                   >  2:1468584‑M1/1‑18 (MQ=255)
                                                                                      ggggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCg                <  2:610689‑M1/89‑1 (MQ=255)
                                                                                      aTGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaa                >  2:816093‑M1/1‑15 (MQ=255)
                                                                                       tGCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag               >  1:185533‑M1/1‑14 (MQ=255)
                                                                                       gggtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGt               <  2:262368‑M1/90‑1 (MQ=255)
                                                                                        gCTCTTCTGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagt              >  1:532575‑M1/1‑13 (MQ=255)
                                                                                         gtcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCt             >  2:737355‑M1/10‑101 (MQ=255)
                                                                                          tcagtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTg            >  1:1465293‑M1/9‑101 (MQ=255)
                                                                                            ttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtg          >  2:300669‑M1/1‑9 (MQ=255)
                                                                                            ttctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtg          >  1:486976‑M1/1‑9 (MQ=255)
                                                                                            agtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTa          <  2:180680‑M1/95‑1 (MQ=255)
                                                                                             tctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtga         <  1:1673004‑M1/101‑94 (MQ=255)
                                                                                             gtacaATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTAc         <  1:661892‑M1/96‑1 (MQ=255)
                                                                                              ctGTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa        >  1:1274336‑M1/1‑7 (MQ=255)
                                                                                                gTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatc      >  1:506279‑M1/1‑5 (MQ=255)
                                                                                                gTATTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatc      >  2:215113‑M1/1‑5 (MQ=255)
                                                                                                caATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGt      >  2:1319501‑M1/3‑101 (MQ=255)
                                                                                                   tttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcact   <  1:834367‑M1/101‑100 (MQ=255)
                                                                                                   tttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcact   >  1:1453150‑M1/1‑2 (MQ=255)
                                                                                                    ttgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcacta  <  2:963728‑M1/101‑101 (MQ=255)
                                                                                                    ttGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGTCGAt  <  2:526379/101‑1 (MQ=255)
                                                                                                    ttGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGTCGAt  <  1:440194/101‑1 (MQ=255)
                                                                                                    ttGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAAGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGTCGAt  <  2:693741/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGCCCGTCTGTACCGTCGAT  >  REL606/3841094‑3841294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.