| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,537,178 | +GTACTGACCCCAAAA :: IS150 (–) :: +CAA | coding (40/2199 nt) | zntA → | zinc, cobalt and lead efflux system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666133 | NA (NA) | 89 (1.570) +TGGGGTCAGTAC |
66/176 | 0.0 | 99.0% | pseudogene (355/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 |
| ? | REL606 | = 3537178 | 1 (0.020) | coding (40/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
| * | ? | REL606 | 3537179 = | 1 (0.020) | 67 (1.070) +TTG |
52/194 | 0.2 | 98.6% | coding (41/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
TGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑TTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACAGCTCG > REL606/666043‑666230 | tGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttt > 2:775918/1‑101 (MQ=255)tGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttt > 2:1150422/1‑101 (MQ=255)tGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttt < 1:872176/101‑1 (MQ=255) gAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCtttt < 2:1321153/101‑1 (MQ=255) aaaTTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttttt < 2:54763/101‑1 (MQ=255) aaaTTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttttt < 1:1486536/101‑1 (MQ=255) aaaTTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCttttt < 2:45971/101‑1 (MQ=255) aTTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCa > 1:534251/1‑101 (MQ=255) aaaGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAg < 1:1021004/101‑1 (MQ=255) aaaGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAg > 2:473770/1‑101 (MQ=255) aGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGcc > 1:386256/1‑101 (MQ=255) aGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGcc < 1:514019/101‑1 (MQ=255) gACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCt > 2:754383/1‑101 (MQ=255) cAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATc > 2:495947/1‑101 (MQ=255) cAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATc > 2:798676/1‑101 (MQ=255) aaTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATcg > 1:1227492/1‑101 (MQ=255) aaTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATcg > 1:1235210/1‑101 (MQ=255) aTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATcgc > 1:206869/1‑101 (MQ=255) tGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGt > 1:798510/1‑101 (MQ=255) gAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGtt > 1:1229718/1‑101 (MQ=255) aaTATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGttt < 1:150360/101‑1 (MQ=255) tatCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTaa > 1:1126712/1‑101 (MQ=255) ggAATCAGTCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCAc < 1:495952/101‑1 (MQ=255) gAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACt < 1:183604/101‑1 (MQ=255) aaTCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACtt > 1:1560540/1‑101 (MQ=255) aTCAGACCTATATGGCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACttt < 2:1143716/101‑1 (MQ=255) aTCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACttt > 2:68144/1‑101 (MQ=255) aTCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACttt > 2:532109/1‑101 (MQ=255) aGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCAc > 1:1219144/1‑101 (MQ=255) gACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCAcc < 1:1246411/101‑1 (MQ=255) aCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCt > 2:1273793/1‑101 (MQ=255) ccTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTg > 1:164424/1‑101 (MQ=255) cTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTgc > 2:532788/1‑101 (MQ=255) tatGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGcc < 1:775923/101‑1 (MQ=255) atGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCa > 2:367352/1‑101 (MQ=255) tGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAg < 2:248679/101‑1 (MQ=255) ccTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAggg > 1:1658054/1‑101 (MQ=255) cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGt > 2:910633/1‑101 (MQ=255) tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGATc < 2:1071544/101‑1 (MQ=255) gtgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAg > 2:944486/1‑101 (MQ=255) gtgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAg > 1:595948/1‑101 (MQ=255) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAgg < 2:265284/101‑1 (MQ=255) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAgg > 2:1210726/1‑101 (MQ=255) tgtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAgg > 1:106661/1‑101 (MQ=255) gtTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGt > 1:146578/1‑101 (MQ=255) tttAACTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGTCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGtt < 2:206923/101‑1 (MQ=255) aaCTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTc > 1:736755/1‑101 (MQ=255) aCTGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCg < 1:798681/101‑1 (MQ=255) tGTCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGAt > 2:523231/1‑101 (MQ=255) tGTCCAACTTTTTGGGGGCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGAt > 2:1428502/1‑101 (MQ=255) tCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATaa > 2:1503475/1‑101 (MQ=255) tCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATaa < 2:456252/101‑1 (MQ=255) tCCAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATaa < 2:1210062/101‑1 (MQ=255) ccAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAAt < 2:274111/101‑1 (MQ=255) ccAACTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAAt > 1:1257312/1‑101 (MQ=255) aaCTTTTTGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCg < 1:331095/101‑1 (MQ=255) ttttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAg < 2:1265962/101‑1 (MQ=255) ttttGGGGTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAg < 1:532793/101‑1 (MQ=255) gggTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAg < 1:532114/101‑1 (MQ=255) ggTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAgg > 1:418779/1‑101 (MQ=255) gTCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAggg > 1:1144591/1‑101 (MQ=255) tCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGa > 1:1543606/1‑101 (MQ=255) tCAGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGa > 2:898719/1‑101 (MQ=255) aGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAAc > 1:347107/1‑101 (MQ=255) aGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAAc > 2:1637490/1‑101 (MQ=255) aGTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAAc < 2:1126707/101‑1 (MQ=255) gttcattttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACa < 2:1444095/95‑1 (MQ=255) gTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACa < 1:1579741/101‑1 (MQ=255) gTACATTTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACa < 1:569397/101‑1 (MQ=255) tacattttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACAg < 2:164424/96‑1 (MQ=255) attttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACAGCTc > 2:1250192/3‑101 (MQ=255) attttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACAGCTc > 2:935674/3‑101 (MQ=255) attttCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAACCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACAGCTc > 2:260394/3‑101 (MQ=255) ttttCAGGTTTTGTTCAGGAGCCGGCGATTTACCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGTGAACAGCTCg < 2:1131293/100‑1 (MQ=255) | TGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑TTTCAGGGCTTTTTCACGAGCCGGCGCTTTATCGCGTTTAAGCACTTTCACCTGCGCCAGGGTCAGGTTTTCGATAATCGACAGATGAGGGAACAGCTCG > REL606/666043‑666230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |