| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,415,710 | IS150 (–) +3 bp | coding (848‑850/1413 nt) | cycA → | D‑alanine/D‑serine/glycine transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 71 (1.100) | 57/200 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 4415710 = | 0 (0.000) | coding (848/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter | |||||
| * | ? | REL606 | = 3894996 | NA (NA) | 80 (1.260) | 64/198 | 0.0 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4415712 | 0 (0.000) | coding (850/1413 nt) | cycA | D‑alanine/D‑serine/glycine transporter | |||||
AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894899‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAATGGA < REL606/4415712‑4415613 AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAA < 1:1127913/101‑1 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGGCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAA < 1:193169/101‑1 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAA > 2:201384/1‑101 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAAC > 2:1137786/1‑101 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAAC < 2:358638/101‑1 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAAC < 2:1288349/101‑1 ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACG > 2:1340059/1‑101 CCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTT < 1:554875/101‑1 CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGTGTCAGTACAAAAACGGGCTTT > 2:197949/1‑101 AAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCT < 2:1539926/101‑1 AAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCT < 1:1705702/101‑1 ATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCC > 1:556706/1‑101 TAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGG > 1:315850/1‑101 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGA > 2:1341354/1‑101 AGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACT < 1:101682/101‑1 GGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTA < 1:1505110/101‑1 GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTAC > 1:654978/1‑101 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAAC < 2:1407092/101‑1 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACT > 2:1363257/1‑101 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCA < 2:480555/101‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCAC < 1:863685/101‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCAC < 2:383907/101‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCAC > 2:1531825/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG > 1:1508121/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG < 2:1317986/101‑1 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACG > 2:436775/1‑101 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGC > 1:999557/1‑101 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGC > 2:422075/1‑101 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGGCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGC > 1:1378787/1‑101 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTC < 2:1506081/101‑1 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCA > 2:510212/1‑101 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCA > 1:1027837/1‑101 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCA > 1:692073/1‑101 ATCGGAATCAGGCCTATATGCCTCGTGTTTAACTGTCCAAGTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCAC < 1:391351/101‑1 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCAC > 1:232297/1‑101 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACAT > 1:1622416/1‑101 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACAT < 2:1232591/101‑1 ATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACAT < 1:1529420/101‑1 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAA > 1:192984/1‑101 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAAT < 2:1192787/101‑1 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAAT < 1:353692/101‑1 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAAT > 1:979259/1‑101 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCAC < 1:1137791/101‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACA > 2:159134/1‑101 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAAT < 2:1636751/101‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATC > 2:818269/1‑101 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCA > 2:390833/1‑101 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAG > 1:1020958/1‑101 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGC < 2:232297/101‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGC > 2:412813/1‑101 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGC > 2:99489/1‑101 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCG > 2:519740/1‑101 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCG < 1:102079/101‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAG < 2:1073461/101‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAG < 1:350964/101‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGAC > 2:991024/1‑101 TAACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGT < 1:929609/101‑1 AACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTA < 2:1569998/101‑1 ACTGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAG < 2:1673202/101‑1 TGTCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAA < 2:1620293/101‑1 TCCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACA > 1:1051835/1‑101 CCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACAT > 1:389130/1‑101 CCAACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACAT < 1:1363263/101‑1 AACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAA < 1:519745/101‑1 ACTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAAT < 1:1625133/101‑1 CTTTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATG > 2:178082/1‑101 TTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGAT < 2:1011804/101‑1 TTTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGAT < 2:592045/101‑1 TTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATA > 2:1548204/1‑101 TTTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATA < 2:404028/101‑1 TTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATAC < 2:419448/101‑1 TTGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATAC < 1:502781/101‑1 TGGGGTCAGTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACG < 2:456338/101‑1 GTACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAA > 1:93004/1‑101 TACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAAT < 1:495366/101‑1 TACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAAT < 2:1268962/101‑1 TACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAAT > 1:1162178/1‑101 TACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAAT > 1:1405935/1‑101 TACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAAT < 1:724708/101‑1 ACACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAATG < 1:818274/101‑1 ACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAATGGA < 2:1690666/101‑1 ACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAATGGA > 1:1572110/1‑101 ACAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAATGGA > 2:1024109/1‑101 AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894899‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAAACGGGCTTTTCTCCGGGACTACCGAACTCCACGGCGTCACGGACATAATCACAATCAGCGCGAAGACGTAGAACATAATGATACGGATCGGAATGGA < REL606/4415712‑4415613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |