New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	2655781 =	1 (0.020)	75 (1.190)	56/196	0.1	98.7%	coding (662/732 nt)	yfiH	hypothetical protein
	?	REL606	2774435 =	NA (NA)					noncoding (1443/1443 nt)	IS150	repeat region

ATAAGTATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2655880‑2655781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT  >  REL606/2774435‑2774530                                                                                                                                                                                                      ATAAGTATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT                                                                                                 >  1:900435/1‑101 ATAAGTATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT                                                                                                 <  2:103085/101‑1  TAAGTATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATG                                                                                                >  1:81929/1‑101   AAGTATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGT                                                                                               <  1:901551/101‑1     GTATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTAC                                                                                             <  1:756210/101‑1     GTATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTAC                                                                                             <  1:834178/101‑1      TATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACT                                                                                            <  2:335233/101‑1         CTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGAC                                                                                         <  1:617650/101‑1            GCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCC                                                                                      >  1:734117/1‑101             CGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCA                                                                                     <  2:658170/101‑1             CGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCA                                                                                     >  2:1111228/1‑101               GATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAA                                                                                   >  2:643700/1‑101               GATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAA                                                                                   >  2:125106/1‑101                ATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAA                                                                                  >  1:508513/1‑101                    TTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTT                                                                              >  2:682985/1‑101                     TATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTG                                                                             <  1:1646267/101‑1                      ATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGG                                                                            >  1:448426/1‑101                      ATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGG                                                                            <  1:330044/101‑1                      ATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTGGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGG                                                                            <  2:1482265/101‑1                       TCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGA                                                                           >  2:796131/1‑101                       TCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGA                                                                           <  1:1124712/101‑1                        CTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGAC                                                                          >  2:1612165/1‑101                        CTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGAC                                                                          <  2:1524657/101‑1                         TGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACA                                                                         <  2:480650/101‑1                          GCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAG                                                                        <  1:486378/101‑1                          GCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAG                                                                        >  1:303046/1‑101                          GCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAG                                                                        <  1:656206/101‑1                           CTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGT                                                                       >  2:160216/1‑101                           CTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGT                                                                       >  1:1688541/1‑101                           CTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGCACTGACCCCAAAAAGTTCGACAGT                                                                       >  2:1096316/1‑101                             TGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTA                                                                     <  2:1519804/101‑1                                 CGGCAGCGTCTGGCGAGCGTTGGTGTTCAACAAATTTTCGGCGGCGACCGATCTAAATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACA                                                                 >  2:1689178/1‑101                                  GGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC                                                                <  2:944993/101‑1                                    CAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA                                                              >  1:1479163/1‑101                                    CAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA                                                              >  2:495398/1‑101                                     AGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG                                                             >  1:692753/1‑101                                     AGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG                                                             >  2:773485/1‑101                                     AGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG                                                             >  2:286407/1‑101                                     AGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGAACAGTTAAACACGAG                                                             >  1:1079489/1‑101                                      GCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG                                                            <  2:777565/101‑1                                       CGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC                                                           >  2:1112880/1‑101                                        GTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA                                                          <  1:252704/101‑1                                          CTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA                                                        >  1:1214624/1‑101                                           TGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT                                                       <  1:710020/101‑1                                                AGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC                                                  <  1:1311410/101‑1                                                  CGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG                                                >  1:915653/1‑101                                                   GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA                                               >  1:1338210/1‑101                                                   GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA                                               >  1:1697710/1‑101                                                    TTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAT                                              >  2:1622200/1‑101                                                      GGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTC                                            >  2:913467/1‑101                                                       GTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCC                                           <  1:314693/101‑1                                                            GAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT                                      <  1:853989/101‑1                                                            GAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT                                      <  2:734112/101‑1                                                                 AATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAT                                 <  1:322631/101‑1                                                                  ATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT                                <  1:911174/101‑1                                                                    TTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGG                              <  2:507286/101‑1                                                                          CGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG                        >  1:926287/1‑101                                                                            GCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAC                      <  2:1479157/101‑1                                                                             CGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACC                     >  2:882855/1‑101                                                                              GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCT                    >  1:378386/1‑101                                                                              GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCT                    >  1:1138615/1‑101                                                                               ACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTT                   <  2:18461/101‑1                                                                                  GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTA                >  1:518315/1‑101                                                                                  GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTA                >  1:1562557/1‑101                                                                                      TACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTT            <  1:184260/101‑1                                                                                       ACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTC           >  1:1477933/1‑101                                                                                        CATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCA          <  1:125106/101‑1                                                                                         ATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAG         <  2:909382/101‑1                                                                                          agccctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGG        >  1:104366/7‑101                                                                                           gccctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGC       >  2:1468783/6‑101                                                                                            TACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCT      >  1:1260002/1‑101                                                                                             ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTA     >  1:62835/1‑101                                                                                              ctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAA    <  2:1567030/99‑1                                                                                              ctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAA    >  1:1454317/3‑101                                                                                               GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAT   <  2:967000/101‑1                                                                                               GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAT   <  1:1396385/101‑1                                                                                               GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAT   <  1:882860/101‑1                                                                                                GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT  <  2:1541659/101‑1                                                                                                                                                                                                      ATAAGTATCTGGCGGATATTTATCTGCTTGCCCGGCAGCGTCTGGCGAGCGTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2655880‑2655781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATT  >  REL606/2774435‑2774530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.