| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2655781 = | 1 (0.020) | 75 (1.190) | 56/196 | 0.1 | 98.7% | coding (662/732 nt) | yfiH | hypothetical protein |
| ? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
GTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTAT > REL606/2655685‑2655880 | aattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTc < 2:1541659‑M1/5‑1 (MQ=255) attagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTcc < 1:882860‑M1/6‑1 (MQ=255) attagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTcc < 2:967000‑M1/6‑1 (MQ=255) attagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTcc < 1:1396385‑M1/6‑1 (MQ=255) ttagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTttcag < 2:1567030‑M1/7‑3 (MQ=255) ttagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTttcag > 1:1454317‑M1/95‑99 (MQ=255) tagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGt > 1:62835‑M1/94‑101 (MQ=255) agcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGta > 1:1260002‑M1/93‑101 (MQ=255) gcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacattttcagggc > 2:1468783‑M1/92‑96 (MQ=255) cctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacattttcagggct > 1:104366‑M1/91‑95 (MQ=255) ctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTatat < 2:909382‑M1/12‑1 (MQ=255) tgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATg < 1:125106‑M1/13‑1 (MQ=255) gaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGt > 1:1477933‑M1/88‑101 (MQ=255) aaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTa < 1:184260‑M1/15‑1 (MQ=255) taaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAAc > 1:518315‑M1/83‑101 (MQ=255) taaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAAc > 1:1562557‑M1/83‑101 (MQ=255) aaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGt < 2:18461‑M1/22‑1 (MQ=255) aggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTc > 1:378386‑M1/79‑101 (MQ=255) aggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTc > 1:1138615‑M1/79‑101 (MQ=255) ggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcg > 2:882855‑M1/78‑101 (MQ=255) gtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcgc < 2:1479157‑M1/25‑1 (MQ=255) ctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcgccg > 1:926287‑M1/75‑101 (MQ=255) ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGaaa < 2:507286‑M1/33‑1 (MQ=255) atCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAAt > 2:1467196/1‑101 (MQ=255) aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAAt < 1:911174‑M1/35‑1 (MQ=255) attgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAAtt < 1:322631‑M1/36‑1 (MQ=255) atatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTc < 1:853989‑M1/41‑1 (MQ=255) atatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTc < 2:734112‑M1/41‑1 (MQ=255) ggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAacac < 1:314693‑M1/46‑1 (MQ=255) gaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACAcc > 2:913467‑M1/55‑101 (MQ=255) atcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCaa > 2:1622200‑M1/53‑101 (MQ=255) tcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAAc > 1:1338210‑M1/52‑101 (MQ=255) tcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAAc > 1:1697710‑M1/52‑101 (MQ=255) cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACg > 1:915653‑M1/51‑101 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCt < 1:1311410‑M1/53‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCa < 1:710020‑M1/58‑1 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAg > 1:1214624‑M1/43‑101 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGAc < 1:252704‑M1/61‑1 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACg > 2:1112880‑M1/40‑101 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGc < 2:777565‑M1/63‑1 (MQ=255) ctcgtgtttaactgttcaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCt > 1:1079489‑M1/38‑101 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCt > 2:773485‑M1/38‑101 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCt > 1:692753‑M1/38‑101 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCt > 2:286407‑M1/38‑101 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTg > 1:1479163‑M1/37‑101 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTg > 2:495398‑M1/37‑101 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGcc < 2:944993‑M1/67‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATTTAGATCGGTCGCCGCCGAAAATTTGTTGAACACCAACGCTCGCCAGACGCTGCCg > 2:1689178‑M1/34‑101 (MQ=255) taactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCa < 2:1519804‑M1/72‑1 (MQ=255) actgtcgaactttttggggtcagtgcaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAg > 2:1096316‑M1/28‑101 (MQ=255) actgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAg > 2:160216‑M1/28‑101 (MQ=255) actgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAg > 1:1688541‑M1/28‑101 (MQ=255) ctgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGc < 1:486378‑M1/75‑1 (MQ=255) ctgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGc > 1:303046‑M1/27‑101 (MQ=255) ctgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGc < 1:656206‑M1/75‑1 (MQ=255) tgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCa < 2:480650‑M1/76‑1 (MQ=255) gtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAg < 2:1524657‑M1/77‑1 (MQ=255) gtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAg > 2:1612165‑M1/25‑101 (MQ=255) tccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGa > 2:796131‑M1/24‑101 (MQ=255) tccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGa < 1:1124712‑M1/78‑1 (MQ=255) ccaactttttggggtcagtacaTTTTCCGTATATGTACCACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGAt < 2:1482265‑M1/79‑1 (MQ=255) ccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGAt > 1:448426‑M1/23‑101 (MQ=255) ccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGAt < 1:330044‑M1/79‑1 (MQ=255) caactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATa < 1:1646267‑M1/80‑1 (MQ=255) aactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATaa > 2:682985‑M1/21‑101 (MQ=255) ttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAatat > 1:508513‑M1/17‑101 (MQ=255) tttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATc > 2:643700‑M1/16‑101 (MQ=255) tttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATc > 2:125106‑M1/16‑101 (MQ=255) tggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCg > 2:1111228‑M1/14‑101 (MQ=255) tggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCg < 2:658170‑M1/88‑1 (MQ=255) ggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGc > 1:734117‑M1/13‑101 (MQ=255) gtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAg < 1:617650‑M1/92‑1 (MQ=255) agtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATa < 2:335233‑M1/95‑1 (MQ=255) gtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATAc < 1:756210‑M1/96‑1 (MQ=255) gtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATAc < 1:834178‑M1/96‑1 (MQ=255) acaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACtt < 1:901551‑M1/98‑1 (MQ=255) caTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTa > 1:81929‑M1/3‑101 (MQ=255) aTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTAt < 2:103085‑M1/100‑1 (MQ=255) aTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTAt > 1:900435‑M1/2‑101 (MQ=255) | GTACCGGATCGTCTTGATTCTTTAGGTTATATCAGCCAAATGAAACTTGCCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACGCTCGCCAGACGCTGCCGGGCAAGCAGATAAATATCCGCCAGATACTTAT > REL606/2655685‑2655880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |