Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
JC JC | REL606 | 1,354,425 | IS150 (–) +3 bp | coding (1053‑1055/1644 nt) | sapA ← | predicted antimicrobial peptide transporter subunit |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 47 (0.730) | 40/200 | 0.7 | 97.9% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1354425 = | 1 (0.020) | coding (1055/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
* | ? | REL606 | = 666130 | NA (NA) | 64 (1.000) | 50/198 | 0.3 | 98.4% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1354427 | 1 (0.020) | coding (1053/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit |
GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666034‑666130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGCCCAC < REL606/1354427‑1354329 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAC > 1:405072/1‑101 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACG > 2:56347/1‑101 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACG < 2:1449586/101‑1 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACG < 1:296929/101‑1 ATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGA > 2:73473/1‑101 TAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGG < 1:1016286/101‑1 AGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGC > 1:720869/1‑101 CCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTA > 1:1446835/1‑101 CTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAA > 2:1144153/1‑101 AAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAAT > 1:1531019/1‑101 AAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAAT < 1:449185/101‑1 TAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACT < 2:1692733/101‑1 AGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAAT < 2:1162923/101‑1 GGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATA < 2:1284020/101‑1 GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATAC < 2:863581/101‑1 GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATC < 2:1196061/101‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCC > 1:556307/1‑101 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCG < 1:639576/101‑1 CAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCG > 2:108657/1‑101 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCTGCGc > 2:510126/1‑100 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA > 1:940252/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA > 1:1699420/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA > 1:1278806/1‑101 AATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCG < 2:12124/101‑1 GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAAC < 2:1673131/101‑1 GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAAC < 2:839281/101‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACA > 1:483842/1‑101 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTG > 1:345825/1‑101 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTTAATACAATCCGGCGAAATCGCGCGAACAGTTGA > 1:1659470/1‑101 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGA > 2:1129735/1‑101 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAG < 1:1293543/101‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTT > 1:839942/1‑101 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTT > 2:430816/1‑101 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGAGAAATCGCGCGAACAGTTGAAGTCGTTG > 2:469753/1‑101 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGG < 2:1222349/101‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGG < 2:1306985/101‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGG > 1:1669648/1‑101 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGG > 1:586378/1‑101 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCT > 1:1195809/1‑101 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTG > 1:375459/1‑101 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGG < 2:573607/101‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGG > 1:1196813/1‑101 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGA > 1:914556/1‑101 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAAGCCGGCCAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGA < 2:1654478/101‑1 AACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAAT < 1:420240/101‑1 CTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTT < 2:122490/101‑1 GTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAA > 2:754797/1‑101 GTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAA < 1:1589576/101‑1 GTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAA < 1:1419889/101‑1 TCCAACTTTTTGGGGTCAGTACACAACGAGGTTAAAATTACTGATTACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAAC < 1:73473/101‑1 TCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAAC < 1:690173/101‑1 TCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAAC < 2:962076/101‑1 ACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTG > 2:934278/1‑101 TTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAA < 2:1278801/101‑1 TTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAA < 2:1458886/101‑1 TTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACT < 2:1004300/101‑1 GTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGG > 1:655276/1‑101 TCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGT < 2:1699414/101‑1 TCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGT < 2:1669642/101‑1 TCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGT < 1:608735/101‑1 CAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTG > 2:1132092/1‑101 AGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGn < 1:611447/101‑2 GTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACATTGGGTGCC > 1:1485074/1‑101 CACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGCCCAC < 1:1445518/101‑1 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666034‑666130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGCCCAC < REL606/1354427‑1354329 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |