Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
JC JC | REL606 | 1,354,425 | IS150 (–) +3 bp | coding (1053‑1055/1644 nt) | sapA ← | predicted antimicrobial peptide transporter subunit |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 47 (0.730) | 40/200 | 0.7 | 97.9% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1354425 = | 1 (0.020) | coding (1055/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
* | ? | REL606 | = 666130 | NA (NA) | 64 (1.000) | 50/198 | 0.3 | 98.4% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1354427 | 1 (0.020) | coding (1053/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit |
TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664781‑664688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTG > REL606/1354425‑1354524 TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCAT < 1:278756/101‑1 CACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAG < 1:1365636/101‑1 CGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGC > 2:973969/1‑101 GACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCC > 1:318398/1‑101 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCAC > 1:1148790/1‑101 GCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCG > 2:1417918/1‑101 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCG < 2:373632/101‑1 AGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATA < 1:1013367/101‑1 AGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATA < 2:296214/101‑1 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGA > 1:501827/1‑101 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAG < 1:635846/101‑1 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAG > 2:1567256/1‑101 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAG < 2:207267/101‑1 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGG < 1:1326168/101‑1 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCC < 1:52978/101‑1 TTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGC > 2:1080247/1‑101 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTT > 1:1142773/1‑101 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTT > 1:687798/1‑101 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCA < 1:925058/101‑1 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCC < 1:1083823/101‑1 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCG > 1:1122055/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGCTTCAGCCa > 1:984328/1‑100 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTA > 1:513381/1‑101 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTA > 2:410620/1‑101 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCA > 2:1165521/1‑101 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAAT < 2:1576190/101‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGA > 2:384514/1‑101 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGA > 1:228917/1‑101 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGCTTCAGCCGTACCATAATAGA > 1:1300699/1‑101 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGAT > 1:884628/1‑101 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATG > 2:483240/1‑101 CCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGTGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGG > 2:830791/1‑101 CATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGA < 2:1225713/101‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGAT > 2:1005197/1‑101 CATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCA > 1:1246/1‑101 TCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATC < 2:210026/101‑1 CGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCA < 1:384519/101‑1 TCCAACAAAATGGGTGCACTACATTGTCATAGGCCCACGGGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGG < 1:282569/101‑1 ATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTA > 1:349013/1‑101 GGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATT < 2:1693414/101‑1 GTGCAGTACATTGTGATAGGCCGACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCAAAATAGATGGATTGCATCAGGCGCTGGTTATTAA < 1:1192304/101‑1 GCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATC < 1:84439/101‑1 CAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCG < 2:1434883/101‑1 GTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCC > 1:1204108/1‑101 TACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCA > 2:1512006/1‑101 CATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGT > 1:24392/1‑101 ATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTG > 2:1053926/1‑101 TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664781‑664688 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTG > REL606/1354425‑1354524 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |