Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
JC JC | REL606 | 1,270,660 | IS150 (–) +4 bp | intergenic (‑167/+235) | ldrC ← / ← chaA | toxic polypeptide, small/calcium/sodium:proton antiporter |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 664688 = | NA (NA) | 59 (0.940) | 52/196 | 0.2 | 96.6% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | 1270660 = | 2 (0.030) | intergenic (‑167/+238) | ldrC/chaA | toxic polypeptide, small/calcium/sodium:proton antiporter | |||||
* | ? | REL606 | = 666130 | NA (NA) | 77 (1.200) | 56/200 | 0.1 | 97.4% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 1270663 | 2 (0.030) | intergenic (‑170/+235) | ldrC/chaA | toxic polypeptide, small/calcium/sodium:proton antiporter |
AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666033‑666130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACAACAAAAC < REL606/1270663‑1270564 AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCG < 1:950323/101‑1 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGG > 1:1110708/1‑101 GAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGG < 2:978344/101‑1 GCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGC < 1:1187269/101‑1 AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATG > 1:883886/1‑101 AATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATG < 2:296646/101‑1 TTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTT > 1:334002/1‑101 TTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTT > 1:722959/1‑101 TTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTT < 2:1446658/101‑1 TTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTT > 2:1717711/1‑101 AAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGC < 2:1518734/101‑1 AAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGC < 2:927146/101‑1 AAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATAAGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGC > 1:188951/1‑101 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCG < 2:384239/101‑1 AAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGG < 1:433273/101‑1 GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGG > 2:1651155/1‑101 GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGG > 2:991680/1‑101 CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCT < 1:1602837/101‑1 CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCT > 2:486038/1‑101 CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAAATGTCCAACTTTTTGGGGTCAGTACACCGATGAGGCGCAATGTTGCGGGCGCT > 2:683074/1‑101 TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTT < 1:1404591/101‑1 GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTT < 1:136824/101‑1 GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTT < 1:753742/101‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTA > 1:151604/1‑101 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTA > 1:608707/1‑101 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTA > 1:67831/1‑101 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTAT < 2:1453064/101‑1 AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCT > 1:307256/1‑101 ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTG < 1:1178971/101‑1 TGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGCGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGT < 2:1058546/101‑1 GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTG > 1:162952/1‑101 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCA > 1:190947/1‑101 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCAT < 1:1438078/101‑1 GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGGGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGT > 2:1166612/1‑101 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTT > 2:1220643/1‑101 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTG > 1:1408717/1‑101 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTG < 2:518382/101‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGA > 1:707437/1‑101 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAA > 2:160727/1‑101 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAA > 1:1402009/1‑101 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAA > 1:62432/1‑101 cgATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAA > 1:949896/3‑101 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAA > 2:743764/1‑101 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAA > 1:1094117/1‑101 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGA < 1:1063802/101‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAG > 2:353283/1‑101 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGCAAGAGAAAA > 1:781233/1‑101 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAA < 2:139379/101‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAA < 1:1422378/101‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAA > 1:722414/1‑101 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACC > 2:1167420/1‑101 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCC > 2:483520/1‑101 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCC > 2:1113007/1‑101 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCC > 2:655118/1‑101 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCC > 2:635096/1‑101 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCC < 1:480685/101‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCC < 1:1362783/101‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCC < 2:1458713/101‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCC > 1:1170417/1‑101 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCC < 1:1651161/101‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCG > 1:1679446/1‑101 TTTAACTGTCCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGC > 2:960881/1‑101 CCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGA > 2:1115688/1‑101 CCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGA > 2:912929/1‑101 CCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGA < 2:1086383/101‑1 CCAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGA > 2:357900/1‑101 CAACTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAG < 2:1323497/101‑1 CTTTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTA > 2:691792/1‑101 TTTTGGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAA < 2:883881/101‑1 GGGGTCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCT < 2:1408711/101‑1 TCAGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACA < 2:307256/101‑1 AGTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACAAC > 1:291143/1‑101 GTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACAACA < 1:647846/101‑1 GTACACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACAACA > 2:997190/1‑101 CACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACAACAAAA > 2:963263/1‑101 ACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACAACAAAAC < 1:486043/101‑1 ACCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACAACAAAAC < 1:357900/101‑1 AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666033‑666130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGTGAGGCGCAATGTTGCGGGGGCTTTATCCCTGGTGGCATTGGTTGCTGGAAAGAGAAAACCCCCGCACGTTGAGAGGTAAAACCTGACAACAAAAC < REL606/1270663‑1270564 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |