Predicted mutation
evidence seq id position mutation annotation gene description
MC JC JC REL606 490,484 IS150 (+) Δ1 bp :: +CATT intergenic (‑37/+24) ybbN ← / ← ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 490484 490484 1 94 [0] [0] 56 ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 4904830 (0.000)92 (1.430) 65/200 0.0 100% intergenic (‑36/+25) ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 490485 =0 (0.000)56 (0.900)
+AAT
47/194 0.3 100% intergenic (‑38/+23) ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase
?REL606 = 590472 NA (NA)intergenic (+27/‑71) insK‑1/hokE IS150 putative transposase; b3558_1/toxic polypeptide, small

GACCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/490577‑490485
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT  <  REL606/590472‑590374
                                                                                             |||                                                                                                   
GACCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTA                                                                                                >  1:789484/1‑101
 ACCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTAC                                                                                               >  2:1111436/1‑101
  CCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACT                                                                                              <  1:1668895/101‑1
   CTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTG                                                                                             >  1:325457/1‑101
     GGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGAC                                                                                           <  2:1631737/101‑1
       GCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTGAGCCCCAATGTGTACTGACCC                                                                                         >  2:1340927/1‑101
       GCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCC                                                                                         >  1:888799/1‑101
        CAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCC                                                                                        >  2:542547/1‑101
                   CTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGA                                                                             >  2:1357830/1‑101
                    TTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGAC                                                                            <  1:970327/101‑1
                    TTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGAC                                                                            <  1:1713054/101‑1
                    TTAAGCGCCTGCTGCCGGGGCGCGAGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGAC                                                                            >  2:176257/1‑101
                      AAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAG                                                                          >  2:615514/1‑101
                        GCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTT                                                                        <  1:293842/101‑1
                            CTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAAC                                                                    <  1:1280361/101‑1
                            CTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAAC                                                                    >  2:1190890/1‑101
                            CTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAAC                                                                    >  1:427281/1‑101
                             TGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACA                                                                   <  1:1340933/101‑1
                             TGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACA                                                                   >  2:437171/1‑101
                                    GGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA                                                            <  2:336621/101‑1
                                    GGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGACCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA                                                            >  2:521211/1‑101
                                        CGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA                                                        >  1:1586828/1‑101
                                         GCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG                                                       <  2:1155007/101‑1
                                          CGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG                                                      >  1:357090/1‑101
                                            TGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGcc                                                    >  1:1334847/1‑99
                                            TGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC                                                    <  2:715476/101‑1
                                             GATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT                                                   <  1:1064732/101‑1
                                             GATGGACAAAATATTGCAGGGGAGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGACT                                                   >  2:1284822/1‑101
                                              ATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG                                                  <  2:1483896/101‑1
                                              ATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG                                                  <  1:209993/101‑1
                                              ATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG                                                  <  1:1371494/101‑1
                                                 GACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATT                                               <  2:1143959/101‑1
                                                  ACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTC                                              >  2:1701722/1‑101
                                                   CAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCC                                             <  1:615519/101‑1
                                                        TATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT                                        <  1:583970/101‑1
                                                        TATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT                                        <  2:888794/101‑1
                                                              AGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT                                  <  1:1223616/101‑1
                                                                 GGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGA                               <  1:1280305/101‑1
                                                                  GTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAG                              <  1:1515870/101‑1
                                                                   TGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT                             <  1:1199135/101‑1
                                                                   TGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT                             >  1:668389/1‑101
                                                                      GTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG                          >  1:980265/1‑101
                                                                      GTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG                          <  2:585817/101‑1
                                                                           AGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTT                     <  1:1190895/101‑1
                                                                           AGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTT                     <  2:244260/101‑1
                                                                            GCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTT                    <  2:1082481/101‑1
                                                                             CGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTT                   <  2:333898/101‑1
                                                                             CGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTT                   <  1:599157/101‑1
                                                                              GCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTA                  <  1:986567/101‑1
                                                                                 CGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATT               >  2:694781/1‑101
                                                                                   CTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTC             <  1:1206873/101‑1
                                                                                      AAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGG          <  1:101563/101‑1
                                                                                         CCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTA       >  2:1303951/1‑101
                                                                                         CCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTA       >  2:41168/1‑101
                                                                                          CCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAA      >  2:953805/1‑101
                                                                                           CCAATGTGCACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGACTGATTCCGATATTCAATTGGAGTCAGACATTTTAATTTCAGGCTAAT     >  2:101814/1‑101
                                                                                              ATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT  <  1:1131558/101‑1
                                                                                             |||                                                                                                   
GACCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/490577‑490485
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT  <  REL606/590472‑590374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.