Predicted mutation
evidence seq id position mutation annotation gene description
MC JC JC REL606 490,484 IS150 (+) Δ1 bp :: +CATT intergenic (‑37/+24) ybbN ← / ← ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 490484 490484 1 94 [0] [0] 56 ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 4904830 (0.000)92 (1.430) 65/200 0.0 100% intergenic (‑36/+25) ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 490485 =0 (0.000)56 (0.900)
+AAT
47/194 0.3 100% intergenic (‑38/+23) ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase
?REL606 = 590472 NA (NA)intergenic (+27/‑71) insK‑1/hokE IS150 putative transposase; b3558_1/toxic polypeptide, small

GACTGTTCAAGAACCTGTTGCAGGTTAGATTCGTTAATGTTGACAATATTTTCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATGGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGCCCAGGTC  >  REL606/490386‑490577
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attagcctgaaattaaaatgtctgactccaattgaatatcggaatcagtcctatatgcctcgtgtttaactgtccaactttttggggtcagtgcacattgg                                                                                             >  2:101814‑M1/100‑101 (MQ=255)
 ttagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattggg                                                                                            >  2:953805‑M1/99‑101 (MQ=255)
  tagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattgggg                                                                                           >  2:41168‑M1/98‑101 (MQ=255)
  tagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattgggg                                                                                           >  2:1303951‑M1/98‑101 (MQ=255)
     cctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCtt                                                                                        <  1:101563‑M1/7‑1 (MQ=255)
        gaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAg                                                                                     <  1:1206873‑M1/10‑1 (MQ=255)
          aattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcg                                                                                   >  2:694781‑M1/90‑101 (MQ=255)
             taaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgc                                                                                <  1:986567‑M1/15‑1 (MQ=255)
              aaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgcg                                                                               <  2:333898‑M1/16‑1 (MQ=255)
              aaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgcg                                                                               <  1:599157‑M1/16‑1 (MQ=255)
               aaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgcgc                                                                              <  2:1082481‑M1/17‑1 (MQ=255)
                aaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCt                                                                             <  1:1190895‑M1/18‑1 (MQ=255)
                aaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCt                                                                             <  2:244260‑M1/18‑1 (MQ=255)
                     ctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAAc                                                                        >  1:980265‑M1/79‑101 (MQ=255)
                     ctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAAc                                                                        <  2:585817‑M1/23‑1 (MQ=255)
                        actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCa                                                                     >  1:668389‑M1/76‑101 (MQ=255)
                        actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCa                                                                     <  1:1199135‑M1/26‑1 (MQ=255)
                         ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAc                                                                    <  1:1515870‑M1/27‑1 (MQ=255)
                          tccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAcc                                                                   <  1:1280305‑M1/28‑1 (MQ=255)
                             aattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCt                                                                <  1:1223616‑M1/31‑1 (MQ=255)
                                   atatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAata                                                          <  1:583970‑M1/37‑1 (MQ=255)
                                   atatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAata                                                          <  2:888794‑M1/37‑1 (MQ=255)
                                        ggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTg                                                     <  1:615519‑M1/42‑1 (MQ=255)
                                         gaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGt                                                    >  2:1701722‑M1/59‑101 (MQ=255)
                                          aatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTc                                                   <  2:1143959‑M1/44‑1 (MQ=255)
                                             cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCAt                                                <  2:1483896‑M1/47‑1 (MQ=255)
                                             cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCAt                                                <  1:1371494‑M1/47‑1 (MQ=255)
                                             cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCAt                                                <  1:209993‑M1/47‑1 (MQ=255)
                                              agtcctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCTCCCCTGCAATATTTTGTCCATc                                               >  2:1284822‑M1/54‑101 (MQ=255)
                                              agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATc                                               <  1:1064732‑M1/48‑1 (MQ=255)
                                               ggcctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCa                                              >  1:1334847‑M1/53‑101 (MQ=255)
                                               gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCa                                              <  2:715476‑M1/49‑1 (MQ=255)
                                                 cctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCAcg                                            >  1:357090‑M1/51‑101 (MQ=255)
                                                  ctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCAcgc                                           <  2:1155007‑M1/52‑1 (MQ=255)
                                                   tatatgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCAcgcg                                          >  1:1586828‑M1/49‑101 (MQ=255)
                                                       tgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGTCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGcccc                                      >  2:521211‑M1/45‑101 (MQ=255)
                                                       tgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGcccc                                      <  2:336621‑M1/57‑1 (MQ=255)
                                                              tgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGgcagca                               <  1:1340933‑M1/64‑1 (MQ=255)
                                                              tgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGgcagca                               >  2:437171‑M1/38‑101 (MQ=255)
                                                               gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGcagcag                              >  2:1190890‑M1/37‑101 (MQ=255)
                                                               gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGcagcag                              >  1:427281‑M1/37‑101 (MQ=255)
                                                               gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGcagcag                              <  1:1280361‑M1/65‑1 (MQ=255)
                                                                   aactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGgcgc                          <  1:293842‑M1/69‑1 (MQ=255)
                                                                     ctgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCtt                        >  2:615514‑M1/31‑101 (MQ=255)
                                                                       gtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCTCGCGCCCCGGCAGCAGGCGCTTaa                      >  2:176257‑M1/29‑101 (MQ=255)
                                                                       gtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTaa                      <  1:970327‑M1/73‑1 (MQ=255)
                                                                       gtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTaa                      <  1:1713054‑M1/73‑1 (MQ=255)
                                                                        tccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAg                     >  2:1357830‑M1/28‑101 (MQ=255)
                                                                                   ggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTg          >  2:542547‑M1/17‑101 (MQ=255)
                                                                                    gggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGc         >  1:888799‑M1/16‑101 (MQ=255)
                                                                                    gggtcagtacacattGGGGCTCAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGc         >  2:1340927‑M1/16‑101 (MQ=255)
                                                                                      gtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGccc       <  2:1631737‑M1/88‑1 (MQ=255)
                                                                                        cagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGCCCAg     >  1:325457‑M1/12‑101 (MQ=255)
                                                                                         agtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGCCCAgg    <  1:1668895‑M1/91‑1 (MQ=255)
                                                                                          gtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGCCCAGGt   >  2:1111436‑M1/10‑101 (MQ=255)
                                                                                           tacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGCCCAGGTc  >  1:789484‑M1/9‑101 (MQ=255)
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GACTGTTCAAGAACCTGTTGCAGGTTAGATTCGTTAATGTTGACAATATTTTCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATGGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACGCGCCCCGGCAGCAGGCGCTTAAGCACCATTACTGCCCAGGTC  >  REL606/490386‑490577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.