| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,196,656 | IS150 (–) +3 bp | 100% | coding (1350‑1352/1992 nt) | cirA ← | ferric iron‑catecholate outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 108 (1.170) | 57/78 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 2196658 | 0 (0.000) | coding (1350/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter | |||||
| * | ? | REL606 | 2196656 = | 0 (0.000) | 87 (0.920) | 51/80 | NT | 100% | coding (1352/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 270 total aligned reads displayed.
CAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAGG > REL606/2196608‑2196707 | tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt > 1:1000229‑M1/49‑51 (MQ=255)cagccTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGctggtt < 1:7322095/51‑1 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttg < 1:3290688‑M1/4‑2 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGttt < 1:6128493‑M1/4‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttga < 1:8947090‑M1/5‑3 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttga > 1:6274514‑M1/47‑49 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTc < 1:4945236‑M1/5‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTc < 1:8853740‑M1/5‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTc < 1:7414340‑M1/5‑1 (MQ=255) gCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtg < 1:7448104‑M2/51‑3 (MQ=255) cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta > 1:5096543‑M2/1‑47 (MQ=255) cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta < 1:7806936‑M2/51‑5 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTg > 1:3073525‑M1/45‑51 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTg > 1:3155156‑M1/45‑51 (MQ=255) ttcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtac > 1:1486081‑M2/1‑46 (MQ=255) ttcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtac > 1:3629373‑M2/1‑46 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacagttgatag < 1:10259714‑M1/8‑6 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTgg > 1:9434500‑M1/44‑51 (MQ=255) tcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtact > 1:7028268‑M2/1‑45 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGtt > 1:4671729‑M1/42‑51 (MQ=255) cttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactg > 1:4274890‑M2/1‑44 (MQ=255) ttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactga < 1:594670‑M2/51‑9 (MQ=255) tcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgac < 1:6366775‑M2/51‑10 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:8320901‑M1/12‑1 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCa < 1:2094858‑M1/13‑1 (MQ=255) cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc > 1:6668840‑M2/1‑41 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg > 1:1129640‑M1/38‑51 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg < 1:8615089‑M1/14‑1 (MQ=255) attccatttcatcgaccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg > 1:9927850‑M1/38‑51 (MQ=255) aCCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacca > 1:4836354‑M2/1‑40 (MQ=255) ccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccca < 1:5745606‑M2/51‑14 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:5152718‑M1/12‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:376564‑M1/12‑1 (MQ=255) cATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaa > 1:847194‑M2/1‑37 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:9129774‑M2/51‑16 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:10806287‑M2/51‑16 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:1945723‑M2/51‑16 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg < 1:426549‑M1/20‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCggg < 1:9692633‑M1/21‑1 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag < 1:3480963‑M2/51‑19 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag > 1:5003448‑M2/1‑33 (MQ=255) agtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagt < 1:9656631‑M2/51‑20 (MQ=255) catcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCt < 1:4731080‑M1/23‑1 (MQ=255) atcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTa < 1:10319676‑M1/24‑1 (MQ=255) atcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTa < 1:1052666‑M1/24‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTAc < 1:8804255‑M1/25‑1 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca < 1:2698522‑M1/28‑1 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca > 1:7098213‑M1/24‑51 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca > 1:6432268‑M1/24‑51 (MQ=255) gCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggaca > 1:3978490‑M2/1‑26 (MQ=255) cccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagt < 1:2226931‑M2/51‑28 (MQ=255) caacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcaca > 1:7625352‑M1/22‑51 (MQ=255) ccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtt > 1:6497430‑M2/1‑23 (MQ=255) ccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtt < 1:8399501‑M2/51‑29 (MQ=255) aacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACaa > 1:8208083‑M1/21‑51 (MQ=255) cAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtta > 1:1877075‑M2/1‑22 (MQ=255) caaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATc < 1:8652500‑M1/33‑1 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:1363347‑M2/1‑21 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:9323647‑M2/1‑21 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa < 1:6533694‑M2/51‑31 (MQ=255) gCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaa > 1:2649736‑M2/1‑20 (MQ=255) gCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaa < 1:6173066‑M2/51‑32 (MQ=255) cTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaac > 1:2506300‑M2/1‑19 (MQ=255) aaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCtt > 1:7893182‑M1/17‑51 (MQ=255) aaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCtt < 1:4082585‑M1/35‑1 (MQ=255) aatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTa < 1:1628969‑M1/36‑1 (MQ=255) cccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacac < 1:7587365‑M2/51‑35 (MQ=255) cccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacac < 1:7145125‑M2/51‑35 (MQ=255) cccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacac > 1:8709106‑M2/1‑17 (MQ=255) tgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACa < 1:5270584‑M1/38‑1 (MQ=255) tgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACa < 1:8537122‑M1/38‑1 (MQ=255) ccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacg > 1:6965849‑M2/1‑16 (MQ=255) ccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacg > 1:5172577‑M2/1‑16 (MQ=255) ccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa < 1:10079583‑M2/46‑31 (MQ=255) gggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAt > 1:2769846‑M1/13‑51 (MQ=255) cAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacga < 1:2010120‑M2/51‑37 (MQ=255) aaCTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgag > 1:4748560‑M2/1‑14 (MQ=255) gtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgc > 1:1013105‑M1/11‑51 (MQ=255) gtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgc > 1:9214558‑M1/11‑51 (MQ=255) gtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgc < 1:5773330‑M1/41‑1 (MQ=255) tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg > 1:1427636‑M1/10‑51 (MQ=255) tttCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggca < 1:9823114‑M2/51‑41 (MQ=255) ttCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:7967556‑M2/1‑10 (MQ=255) tCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcata > 1:1712472‑M2/1‑9 (MQ=255) gtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCAc < 1:10594752‑M1/46‑1 (MQ=255) cGCTGGTTtgtactggccccaaaaagttggacagttaaacacgaggcatat < 1:1185236‑M2/51‑44 (MQ=255) cGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:6719600‑M2/51‑44 (MQ=255) tacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACg < 1:9090402‑M1/47‑1 (MQ=255) gCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatata > 1:7786332‑M2/1‑7 (MQ=255) cTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:2448208‑M2/1‑6 (MQ=255) cTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 1:6864309‑M2/51‑46 (MQ=255) acaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACgg > 1:448787‑M1/4‑51 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg > 1:10544163‑M2/1‑5 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg > 1:6103454‑M2/1‑5 (MQ=255) tGGTTtgtaccgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:8740211‑M2/51‑47 (MQ=255) gtttctggtttcAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAg > 1:799529/1‑51 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:5543174‑M2/51‑49 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:1762606‑M2/51‑49 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:10399868‑M2/1‑3 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:9495421‑M2/1‑3 (MQ=255) | CAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAGG > REL606/2196608‑2196707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |