| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,196,656 | IS150 (–) +3 bp | 100% | coding (1350‑1352/1992 nt) | cirA ← | ferric iron‑catecholate outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 108 (1.170) | 57/78 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 2196658 | 0 (0.000) | coding (1350/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter | |||||
| * | ? | REL606 | 2196656 = | 0 (0.000) | 87 (0.920) | 51/80 | NT | 100% | coding (1352/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 282 total aligned reads displayed.
GCCAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAG > REL606/2196606‑2196706 | gccagccTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGctgg < 1:8390634/51‑1 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGt < 1:7555375‑M1/2‑1 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGt < 1:6501541‑M1/2‑1 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGt > 1:10631636‑M1/50‑51 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGt < 1:2051045‑M1/2‑1 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacagta > 1:9394758‑M1/49‑50 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacagta > 1:4237492‑M1/49‑50 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt > 1:1000229‑M1/49‑51 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt > 1:5376569‑M1/49‑51 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGttt < 1:2657497‑M1/4‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttga > 1:1646548‑M1/47‑49 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttga < 1:8947090‑M1/5‑3 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttga > 1:6274514‑M1/47‑49 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTc < 1:4945236‑M1/5‑1 (MQ=255) cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta > 1:5096543‑M2/1‑47 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTg > 1:3073525‑M1/45‑51 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTg > 1:2854718‑M1/45‑51 (MQ=255) ttcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtac > 1:3629373‑M2/1‑46 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacagttgatag < 1:10259714‑M1/8‑6 (MQ=255) tcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTAGTTtgtact > 1:161062‑M2/1‑45 (MQ=255) cttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactg > 1:4274890‑M2/1‑44 (MQ=255) ttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactga < 1:594670‑M2/51‑9 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:8320901‑M1/12‑1 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:8876020‑M1/12‑1 (MQ=255) tattccatttcatcgtccaacaaaatgggtgtagtacaGTTTCTGGTTTCa > 1:8827622‑M1/39‑51 (MQ=255) cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc < 1:5173776‑M2/51‑11 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg < 1:8615089‑M1/14‑1 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg < 1:3150392‑M1/14‑1 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg > 1:1129640‑M1/38‑51 (MQ=255) attccatttcatcgaccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg > 1:9927850‑M1/38‑51 (MQ=255) aCCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacca > 1:4836354‑M2/1‑40 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGa < 1:2344670‑M1/15‑1 (MQ=255) ccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccca < 1:5745606‑M2/51‑14 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:5152718‑M1/12‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:376564‑M1/12‑1 (MQ=255) cATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaa > 1:847194‑M2/1‑37 (MQ=255) cATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaa < 1:10363916‑M2/51‑15 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:10806287‑M2/51‑16 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg < 1:6980308‑M1/20‑1 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg < 1:6143729‑M1/20‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCggg < 1:1905902‑M1/21‑1 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag < 1:3480963‑M2/51‑19 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGc < 1:6469016‑M1/22‑1 (MQ=255) agtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagt > 1:4681205‑M2/1‑32 (MQ=255) agtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagt < 1:9656631‑M2/51‑20 (MQ=255) catcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCt < 1:5015701‑M1/23‑1 (MQ=255) taAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttg > 1:1972323‑M2/1‑30 (MQ=255) atcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTa < 1:1052666‑M1/24‑1 (MQ=255) atcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTa > 1:9840097‑M1/28‑51 (MQ=255) aaaGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttgg < 1:944923‑M2/51‑23 (MQ=255) gtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTAccc < 1:2590936‑M1/27‑1 (MQ=255) aGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggac > 1:9233336‑M2/1‑27 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca < 1:2698522‑M1/28‑1 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca < 1:6687682‑M1/28‑1 (MQ=255) gCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggaca > 1:3978490‑M2/1‑26 (MQ=255) gCCCCAGCTCCCAACTGTCGCTGGTTtgtactgaccccaaaaagttggaca > 1:7592669‑M2/1‑26 (MQ=255) ccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcac > 1:7712610‑M1/23‑51 (MQ=255) cccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagt < 1:32379‑M2/51‑28 (MQ=255) caacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcaca > 1:1740654‑M1/22‑51 (MQ=255) aacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACaa > 1:8208083‑M1/21‑51 (MQ=255) cAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtta > 1:1220943‑M2/1‑22 (MQ=255) caaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATc < 1:8652500‑M1/33‑1 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa < 1:6533694‑M2/51‑31 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:1363347‑M2/1‑21 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:8009795‑M2/1‑21 (MQ=255) aaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCt < 1:7065939‑M1/34‑1 (MQ=255) cTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaac > 1:4620637‑M2/1‑19 (MQ=255) aaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCtt < 1:4082585‑M1/35‑1 (MQ=255) aaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCtt > 1:7893182‑M1/17‑51 (MQ=255) cccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacac > 1:8709106‑M2/1‑17 (MQ=255) tgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACa < 1:8537122‑M1/38‑1 (MQ=255) ccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa < 1:10079583‑M2/46‑31 (MQ=255) gggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAt > 1:10547388‑M1/13‑51 (MQ=255) aaCTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgag > 1:4748560‑M2/1‑14 (MQ=255) aaCTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgag < 1:9211982‑M2/51‑38 (MQ=255) aaCTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgag > 1:7156526‑M2/1‑14 (MQ=255) gtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgc > 1:1013105‑M1/11‑51 (MQ=255) gtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgc < 1:5773330‑M1/41‑1 (MQ=255) tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg > 1:1427636‑M1/10‑51 (MQ=255) tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg > 1:6375556‑M1/10‑51 (MQ=255) tttCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggca > 1:7102423‑M2/1‑11 (MQ=255) gcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcgc < 1:9794556‑M1/43‑1 (MQ=255) ttCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:7967556‑M2/1‑10 (MQ=255) tCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcata < 1:7356884‑M2/51‑43 (MQ=255) cGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:6719600‑M2/51‑44 (MQ=255) tacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACg > 1:10406384‑M1/5‑51 (MQ=255) tacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACg < 1:9090402‑M1/47‑1 (MQ=255) gCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatata > 1:7786332‑M2/1‑7 (MQ=255) cTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 1:7827566‑M2/51‑46 (MQ=255) cTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 1:6864309‑M2/51‑46 (MQ=255) acaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACgg > 1:448787‑M1/4‑51 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:6255935‑M2/51‑47 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg > 1:6103454‑M2/1‑5 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:7415530‑M2/51‑47 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:2482374‑M2/51‑47 (MQ=255) tGGTTtgtaccgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:8740211‑M2/51‑47 (MQ=255) caGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGc < 1:1791429‑M1/49‑1 (MQ=255) ggTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt > 1:2164311‑M2/1‑4 (MQ=255) aGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCa > 1:5660815‑M1/2‑51 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:9495421‑M2/1‑3 (MQ=255) | GCCAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAG > REL606/2196606‑2196706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |