| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 929,574 | IS150 (+) +3 bp | 100% | coding (946‑948/1653 nt) | hcp ← | hydroxylamine reductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 84 (0.930) | 51/76 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 929574 = | 0 (0.000) | coding (948/1653 nt) | hcp | hydroxylamine reductase | |||||
| * | ? | REL606 | = 929576 | 0 (0.000) | 75 (0.790) | 49/80 | NT | 100% | coding (946/1653 nt) | hcp | hydroxylamine reductase |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 217 total aligned reads displayed.
GGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTG > REL606/929525‑929624 | gggTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGt > 1:7770733/1‑51 (MQ=255) ggTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGtt > 1:8374332/1‑51 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGtt < 1:5196348‑M2/3‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGtt > 1:10756914‑M2/49‑51 (MQ=255) gTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTt > 1:7125989‑M1/1‑50 (MQ=255) gTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTt < 1:4759079‑M1/51‑2 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTc < 1:5563828‑M2/4‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTc < 1:1265372‑M2/4‑1 (MQ=255) tCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtg > 1:10670048‑M1/1‑49 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCg < 1:8168172‑M2/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCg < 1:3624546‑M2/5‑1 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGa > 1:6389685‑M2/46‑51 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGa > 1:10886324‑M2/46‑51 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAg > 1:1821467‑M2/45‑51 (MQ=255) cAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgta > 1:10791621‑M1/1‑47 (MQ=255) cAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgta > 1:9858168‑M1/1‑47 (MQ=255) cAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgta > 1:5245955‑M1/1‑47 (MQ=255) aGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtac > 1:9944815‑M1/1‑46 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGtca > 1:3548268‑M2/41‑51 (MQ=255) tACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgc < 1:3105733‑M1/51‑9 (MQ=255) aCGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgca < 1:1375705‑M1/51‑10 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGtcatc < 1:62050‑M2/13‑1 (MQ=255) gATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacc > 1:7227402‑M1/1‑40 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGtcatca > 1:5750520‑M2/38‑51 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGtcatca > 1:2564145‑M2/38‑51 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGtcatca < 1:2635198‑M2/14‑1 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCAc < 1:6564919‑M2/15‑1 (MQ=255) tCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcaccca < 1:8698748‑M1/51‑14 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACg > 1:7488945‑M2/36‑51 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACg > 1:9036122‑M2/36‑51 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACg > 1:3883298‑M2/36‑51 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGa < 1:4866626‑M2/17‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGAt > 1:2234362‑M2/34‑51 (MQ=255) gTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccatt > 1:654290‑M1/1‑36 (MQ=255) tCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattt < 1:8576536‑M1/51‑17 (MQ=255) gtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATg > 1:367530‑M2/33‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATg > 1:2754867‑M2/33‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATg < 1:6935996‑M2/19‑1 (MQ=255) cATAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccatttt < 1:606768‑M1/51‑18 (MQ=255) tAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgt < 1:3395432‑M1/51‑20 (MQ=255) tAAGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgt < 1:6656795‑M1/51‑20 (MQ=255) aaGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgtt < 1:1827403‑M1/51‑21 (MQ=255) aaGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgtt > 1:4214312‑M1/1‑31 (MQ=255) actgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGcc > 1:10567924‑M2/28‑51 (MQ=255) actgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGcc < 1:10462209‑M2/24‑1 (MQ=255) actgtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGcc > 1:2500087‑M2/28‑51 (MQ=255) aGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttg < 1:10001023‑M1/51‑22 (MQ=255) aGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttg < 1:9084774‑M1/51‑22 (MQ=255) aGCGCCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttg > 1:8312601‑M1/1‑30 (MQ=255) gcgcCTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttgg > 1:1531737‑M1/1‑29 (MQ=255) gtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAgg > 1:10182696‑M2/25‑51 (MQ=255) gtccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAgg < 1:7529075‑M2/27‑1 (MQ=255) tccaactttttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAggg < 1:7843923‑M2/28‑1 (MQ=255) cTACGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacga < 1:7378407‑M1/51‑27 (MQ=255) aCGGTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatg < 1:9291511‑M1/51‑29 (MQ=255) ggTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaa > 1:6972089‑M1/1‑21 (MQ=255) ggTTGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaa < 1:8846014‑M1/51‑31 (MQ=255) ttGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaat < 1:4382318‑M1/51‑33 (MQ=255) ttGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaat < 1:7738643‑M1/51‑33 (MQ=255) ttGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaat > 1:8495348‑M1/1‑19 (MQ=255) tttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGc > 1:7312532‑M2/16‑51 (MQ=255) tttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGc < 1:9748151‑M2/36‑1 (MQ=255) tttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGc < 1:6425985‑M2/36‑1 (MQ=255) tttggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGc < 1:6855647‑M2/36‑1 (MQ=255) tGGGTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatg < 1:8011423‑M1/51‑34 (MQ=255) tggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGa > 1:4319564‑M2/14‑51 (MQ=255) ggTCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatgga > 1:7038573‑M1/1‑16 (MQ=255) ggggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGaa > 1:4958556‑M2/13‑51 (MQ=255) tCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaat < 1:5263648‑M1/51‑38 (MQ=255) tCGATGATGCAGTTtgtactgcacccattttgttggacgatgaaatggaat < 1:3734914‑M1/51‑38 (MQ=255) gggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAAc < 1:8814479‑M2/40‑1 (MQ=255) gggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAAc > 1:6104423‑M2/12‑51 (MQ=255) ggtcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACt > 1:2617218‑M2/11‑51 (MQ=255) gatgatGCAGTTtgtactgcacccattttgttggacgatgaaatggaatag > 1:9213933‑M1/1‑12 (MQ=255) tcagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACt > 1:1203487‑M2/9‑49 (MQ=255) atgatgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:7809475‑M1/1‑11 (MQ=255) atgatgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:10362773‑M1/1‑11 (MQ=255) tgatgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:5285191‑M1/1‑10 (MQ=255) cagtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCa > 1:2924079‑M2/8‑51 (MQ=255) gatgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:6349319‑M1/1‑9 (MQ=255) agtacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCAc > 1:3990362‑M2/7‑51 (MQ=255) atgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccc < 1:2095519‑M1/51‑44 (MQ=255) tgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:7963473‑M1/1‑7 (MQ=255) tgCAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:6287252‑M1/1‑7 (MQ=255) tacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACtt < 1:6786162‑M2/47‑1 (MQ=255) tacaGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACtt < 1:4666046‑M2/47‑1 (MQ=255) gCAGTTtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:4123191‑M1/1‑6 (MQ=255) gCAGTTtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:5865109‑M1/1‑6 (MQ=255) gCAGTTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:4560897‑M1/51‑46 (MQ=255) caGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGc < 1:5025519‑M2/49‑1 (MQ=255) caGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGc > 1:241681‑M2/3‑51 (MQ=255) cAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:1639203‑M1/51‑47 (MQ=255) cAGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:8270267‑M1/51‑47 (MQ=255) aGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:322177‑M1/51‑48 (MQ=255) aGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:3682308‑M1/51‑48 (MQ=255) aGTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:2781490‑M1/51‑48 (MQ=255) aGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCt > 1:5157879‑M2/2‑51 (MQ=255) aGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCt < 1:307903‑M2/50‑1 (MQ=255) gTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:9368681‑M1/51‑49 (MQ=255) gTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:4645727‑M1/51‑49 (MQ=255) | GGGTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCTG > REL606/929525‑929624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |