| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,766,595 | IS150 (+) +3 bp | 100% | coding (1111‑1113/1206 nt) | gltS ← | glutamate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3766595 = | 0 (0.000) | 104 (1.120) | 58/78 | NT | 100% | coding (1113/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3766597 | 0 (0.000) | 116 (1.220) | 57/80 | NT | 100% | coding (1111/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 272 total aligned reads displayed.
CGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGA > REL606/3766547‑3766647 | gCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAt > 1:8051564‑M1/1‑50 (MQ=255) gCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAt > 1:8897707‑M1/1‑50 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc > 1:7116629‑M1/48‑51 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc < 1:5486818‑M1/4‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc < 1:6113454‑M1/4‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg < 1:4988255‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg < 1:483618‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg > 1:10540104‑M1/47‑51 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGc < 1:2560895‑M1/6‑1 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGc < 1:10342277‑M1/6‑1 (MQ=255) aTTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgt > 1:8441507‑M1/1‑48 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGcc < 1:9487085‑M1/7‑1 (MQ=255) tGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtac > 1:8752989‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCa < 1:6787582‑M1/8‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCa < 1:853230‑M1/8‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCa > 1:6926172‑M1/44‑51 (MQ=255) gACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtact < 1:5131901‑M1/51‑7 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtg < 1:1220697‑M1/10‑1 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtg > 1:5671132‑M1/42‑51 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgt > 1:9075902‑M1/41‑51 (MQ=255) cGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgc < 1:608122‑M1/51‑9 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgtg > 1:1970875‑M1/40‑51 (MQ=255) gATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgca > 1:10007110‑M1/1‑42 (MQ=255) atatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcac < 1:9210359‑M1/51‑11 (MQ=255) tatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacc > 1:3222327‑M1/1‑40 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCg < 1:8718311‑M1/14‑1 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCg < 1:8154851‑M1/14‑1 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGa < 1:2375433‑M1/15‑1 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGa < 1:8593215‑M1/15‑1 (MQ=255) atCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcaccc > 1:4178895‑M1/1‑39 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGAc < 1:5190054‑M1/16‑1 (MQ=255) cGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccat > 1:4136678‑M1/1‑37 (MQ=255) tgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACgg > 1:6459398‑M1/34‑51 (MQ=255) tgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACgg < 1:7515984‑M1/18‑1 (MQ=255) aTAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattt < 1:1730986‑M1/51‑17 (MQ=255) aTAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattt > 1:2999434‑M1/1‑35 (MQ=255) tttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGc > 1:2584555‑M1/32‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGc > 1:3486292‑M1/32‑51 (MQ=255) tAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccatttt < 1:8221235‑M1/51‑18 (MQ=255) ttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGcc < 1:9926896‑M1/21‑1 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:729354‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg > 1:3322615‑M1/1‑33 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:644147‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:9333246‑M1/51‑19 (MQ=255) aaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgt > 1:2011759‑M1/1‑32 (MQ=255) aactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCaa < 1:8834785‑M1/23‑1 (MQ=255) aGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgtt < 1:9843477‑M1/51‑21 (MQ=255) aGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgtt > 1:8971828‑M1/1‑31 (MQ=255) gAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttg > 1:5306598‑M1/1‑30 (MQ=255) actgtccaactttttggggtcagtacaAAACGCCa < 1:10790171‑M1/8‑1 (MQ=255) aaCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttgg > 1:5934650‑M1/1‑29 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:305467‑M1/26‑51 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:2176959‑M1/26‑51 (MQ=255) aCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttgga > 1:8904446‑M1/1‑28 (MQ=255) gtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCg < 1:462654‑M1/27‑1 (MQ=255) cGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggac < 1:6606088‑M1/51‑25 (MQ=255) tccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGt < 1:5072092‑M1/28‑1 (MQ=255) gCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacg < 1:7890691‑M1/51‑26 (MQ=255) ccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGtt > 1:6219972‑M1/23‑51 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCaa > 1:2501953‑M1/22‑44 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTc < 1:3141691‑M1/30‑1 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTc < 1:4366810‑M1/30‑1 (MQ=255) aCCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgat < 1:5958560‑M1/51‑28 (MQ=255) ccGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatg < 1:9635625‑M1/51‑29 (MQ=255) actttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAg > 1:9778754‑M1/20‑51 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:925194‑M1/1‑21 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:2436404‑M1/1‑21 (MQ=255) ctttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGt > 1:3656‑M1/19‑51 (MQ=255) aCCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaa > 1:9694990‑M1/1‑20 (MQ=255) aCCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaa < 1:10904389‑M1/51‑32 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaat < 1:1310184‑M1/51‑33 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaat < 1:2394705‑M1/51‑33 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaat < 1:9768340‑M1/51‑33 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt < 1:7833414‑M1/36‑1 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt > 1:2866713‑M1/16‑51 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt < 1:4234562‑M1/36‑1 (MQ=255) cATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatg < 1:8661693‑M1/51‑34 (MQ=255) aTCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatgg < 1:1569886‑M1/51‑35 (MQ=255) aTCGGCACCACCAAAAAtgtactgcacccattttgttggacgatga > 1:10176418‑M1/1‑17 (MQ=255) tggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCg < 1:4750394‑M1/38‑1 (MQ=255) ggCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaat > 1:580846‑M1/1‑14 (MQ=255) ggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCt < 1:3827159‑M1/41‑1 (MQ=255) gCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaata < 1:10014655‑M1/51‑39 (MQ=255) caccacCAAAAAtgtactgcacccattttgttggacgatgaaatggaatag > 1:6352329‑M1/1‑12 (MQ=255) caccaAAAAtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:7666181‑M1/1‑9 (MQ=255) agtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCAt < 1:6295884‑M1/45‑1 (MQ=255) agtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCAt > 1:9421773‑M1/7‑51 (MQ=255) agtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCAt > 1:7475153‑M1/7‑51 (MQ=255) gtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATg < 1:3537930‑M1/46‑1 (MQ=255) gtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATg > 1:8496179‑M1/6‑51 (MQ=255) accaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccc < 1:4454157‑M1/51‑44 (MQ=255) accaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccc < 1:1855184‑M1/51‑44 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:5358049‑M1/1‑6 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:1528601‑M1/1‑6 (MQ=255) acaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGtt < 1:4677144‑M1/48‑1 (MQ=255) caAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTg < 1:6023983‑M1/49‑1 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg > 1:13730‑M1/2‑51 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg < 1:8097999‑M1/50‑1 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg < 1:7763425‑M1/50‑1 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg < 1:2760096‑M1/50‑1 (MQ=255) | CGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGA > REL606/3766547‑3766647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |