| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,766,595 | IS150 (+) +3 bp | 100% | coding (1111‑1113/1206 nt) | gltS ← | glutamate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3766595 = | 0 (0.000) | 104 (1.120) | 58/78 | NT | 100% | coding (1113/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3766597 | 0 (0.000) | 116 (1.220) | 57/80 | NT | 100% | coding (1111/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 279 total aligned reads displayed.
AGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGC > REL606/3766545‑3766645 | aGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaa < 1:6328079/51‑1 (MQ=255) gcgcATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaaa < 1:563955/51‑1 (MQ=255) gcgcATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaaa < 1:7853785/51‑1 (MQ=255) gcgcATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaaa > 1:5054145/1‑51 (MQ=255) gCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAt > 1:7673241‑M1/1‑50 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg > 1:10540104‑M1/47‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg > 1:2216087‑M1/47‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg < 1:483618‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg < 1:4988255‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACg > 1:6229256‑M1/47‑51 (MQ=255) cATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtg > 1:9166014‑M1/1‑49 (MQ=255) cATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtg > 1:1996107‑M1/1‑49 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGc < 1:10342277‑M1/6‑1 (MQ=255) aTTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgt > 1:8199338‑M1/1‑48 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGcc < 1:9487085‑M1/7‑1 (MQ=255) tGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtac > 1:217271‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCa > 1:6926172‑M1/44‑51 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCa < 1:6787582‑M1/8‑1 (MQ=255) gACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtact < 1:3388811‑M1/51‑7 (MQ=255) aCGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactg > 1:5097464‑M1/1‑44 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAtgtg > 1:2516643‑M1/40‑51 (MQ=255) gATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgca > 1:10007110‑M1/1‑42 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGc < 1:5354737‑M1/13‑1 (MQ=255) atatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgc > 1:1402738‑M1/1‑41 (MQ=255) tatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacc > 1:3222327‑M1/1‑40 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCg < 1:8286453‑M1/14‑1 (MQ=255) atCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcaccc < 1:8061185‑M1/51‑13 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGAc < 1:1306056‑M1/16‑1 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGAc < 1:1844297‑M1/16‑1 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGAc < 1:8612845‑M1/16‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACgg > 1:6459398‑M1/34‑51 (MQ=255) tgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACgg > 1:5160872‑M1/34‑51 (MQ=255) gATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccatt < 1:5689845‑M1/51‑16 (MQ=255) gATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccatt < 1:7792337‑M1/51‑16 (MQ=255) tttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGc > 1:2584555‑M1/32‑51 (MQ=255) ttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGcc < 1:9926896‑M1/21‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGcc < 1:1202050‑M1/21‑1 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:8735984‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:7957243‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:644147‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg < 1:729354‑M1/51‑19 (MQ=255) aaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttg > 1:3322615‑M1/1‑33 (MQ=255) taactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCa > 1:8510167‑M1/30‑51 (MQ=255) aactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCaa > 1:8548972‑M1/29‑51 (MQ=255) aGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgtt < 1:9843477‑M1/51‑21 (MQ=255) gAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttg > 1:5306598‑M1/1‑30 (MQ=255) ctgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAg < 1:8884463‑M1/25‑1 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGTGACGGGCCAAAGc < 1:9385017‑M1/26‑1 (MQ=255) tgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:305467‑M1/26‑51 (MQ=255) aCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttgga > 1:2825694‑M1/1‑28 (MQ=255) cGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggac < 1:6606088‑M1/51‑25 (MQ=255) tccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGt > 1:8920296‑M1/24‑51 (MQ=255) gCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacg > 1:10735499‑M1/1‑26 (MQ=255) gCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacg < 1:4175098‑M1/51‑26 (MQ=255) ccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGtt < 1:607827‑M1/29‑1 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTc < 1:4366810‑M1/30‑1 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTc > 1:8812861‑M1/22‑51 (MQ=255) caactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTc < 1:3141691‑M1/30‑1 (MQ=255) ccGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatg < 1:9635625‑M1/51‑29 (MQ=255) ccGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatg < 1:3654144‑M1/51‑29 (MQ=255) aactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCa < 1:9766290‑M1/31‑1 (MQ=255) actttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAg > 1:9778754‑M1/20‑51 (MQ=255) actttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAg < 1:6109261‑M1/32‑1 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:133614‑M1/1‑21 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:2436404‑M1/1‑21 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaa > 1:925194‑M1/1‑21 (MQ=255) ctttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGt < 1:8125351‑M1/33‑1 (MQ=255) aCCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaa > 1:9694990‑M1/1‑20 (MQ=255) aCCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaa > 1:8898421‑M1/1‑20 (MQ=255) ttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGa > 1:249889‑M1/17‑51 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaat < 1:453949‑M1/51‑33 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaat < 1:2394705‑M1/51‑33 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaa < 1:6195354‑M1/50‑32 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt < 1:1083331‑M1/36‑1 (MQ=255) tttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGAt < 1:4234562‑M1/36‑1 (MQ=255) cATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatg > 1:7524124‑M1/1‑18 (MQ=255) cATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatg < 1:591652‑M1/51‑34 (MQ=255) ttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATc > 1:2998814‑M1/15‑51 (MQ=255) aTCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatgg > 1:906553‑M1/1‑17 (MQ=255) aTCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatgg > 1:6389515‑M1/1‑17 (MQ=255) aTCGGCACCACCAAAAAtgtactgcacccattttgttggacgatga > 1:10176418‑M1/1‑17 (MQ=255) tggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCg < 1:4750394‑M1/38‑1 (MQ=255) ggCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaat < 1:1928042‑M1/51‑38 (MQ=255) ggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCt < 1:3827159‑M1/41‑1 (MQ=255) gCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaata < 1:10014655‑M1/51‑39 (MQ=255) caccacCAAAAAtgtactgcacccattttgttggacgatgaaatggaatag > 1:8462360‑M1/1‑12 (MQ=255) tcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGc < 1:7153855‑M1/43‑1 (MQ=255) cagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCa < 1:866172‑M1/44‑1 (MQ=255) caccaAAAAtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:1563471‑M1/1‑9 (MQ=255) agtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCAt > 1:7475153‑M1/7‑51 (MQ=255) agtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCAt > 1:595414‑M1/7‑51 (MQ=255) accaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccc < 1:4454157‑M1/51‑44 (MQ=255) accaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccc > 1:4007121‑M1/1‑8 (MQ=255) ccaAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:541722‑M1/51‑45 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:159638‑M1/51‑46 (MQ=255) caAAAAtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:5972518‑M1/51‑46 (MQ=255) acaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGtt < 1:4677144‑M1/48‑1 (MQ=255) aaaaatgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:9286936‑M1/1‑5 (MQ=255) aAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTgg < 1:2760096‑M1/50‑1 (MQ=255) aaaCGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGc > 1:3506421/1‑51 (MQ=255) | AGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGC > REL606/3766545‑3766645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |