| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | REL606 | 2,103,915 | (CAGC)7→14 | 64.1% | coding (182/216 nt) | ECB_01992 → | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2103888 = | 49 (0.520) | 78 (0.890) | 38/74 | NT | 64.1% | coding (155/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | = 2103915 | 42 (0.480) | coding (182/216 nt) | ECB_01992 | hypothetical protein | |||||
Only 100 of 199 total aligned reads displayed.
CTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTA > REL606/2103838‑2103938 | gtgaaatttgcattagatttcacagccagccagccagccagccagccagcc < 1:6670078‑M1/1‑1 (MQ=255) ttCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTcaca > 1:1104431/1‑51 (MQ=255) tgaaatttgcattagatttcacagccagccagccagccagccagccagcca < 1:5391431‑M1/2‑1 (MQ=255) tCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcag > 1:302155/1‑51 (MQ=255) gaaatttgcattagatttcacagccggccggccagccagccagccagccag > 1:6131148‑M1/49‑51 (MQ=255) gaaatttgcattagatttcacagccagccagccagccagccagccagccag < 1:5077591‑M1/3‑1 (MQ=255) gaaatttgcattagatttcacagccagccagccagccagccagccagccag > 1:7352820‑M1/49‑51 (MQ=255) gaaatttgcattagatttcacagccagccagccagccagccagccagccag < 1:10863530‑M1/3‑1 (MQ=255) gaaatttgcattagatttcacagccagccagccagccagccagccagccag > 1:10086401‑M1/49‑51 (MQ=255) aaatttgcattagatttcacagccagccagccagccagccagccagccagc < 1:10875558‑M1/4‑1 (MQ=255) ttATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagcca < 1:5452055/51‑1 (MQ=255) tttgcattagatttcacagccagccagccagccagccagccagccagccag > 1:2037729‑M1/45‑51 (MQ=255) tATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccag < 1:5141611/51‑1 (MQ=255) tATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccag > 1:5624678/1‑51 (MQ=255) tATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccag > 1:7449230/1‑51 (MQ=255) ttgcattagatttcacagccagccagccagccagccagccagccagccagc < 1:6653903‑M1/8‑1 (MQ=255) ttgcattagatttcacagccagccagccagccagccagccagccagccagc < 1:9217223‑M1/8‑1 (MQ=255) aTTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagc > 1:483909/1‑51 (MQ=255) ttGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagcc > 1:9340110/1‑51 (MQ=255) tgcattagatttcacagccagccagccagccagccagccagccagccagcc < 1:6733595‑M1/9‑1 (MQ=255) tgcattagatttcacagccagccagccagccagccagccagccagccagcc < 1:5408943‑M1/9‑1 (MQ=255) tgcattagatttcacagccagccagccagccagccagccagccagccagcc < 1:10128621‑M1/9‑1 (MQ=255) tGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagcca < 1:3875779/51‑1 (MQ=255) gcattagatttcacagccagccagccagccagccagccagccagccagcca < 1:2180324‑M1/10‑1 (MQ=255) gACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccag < 1:8228249/51‑1 (MQ=255) attagatttcacagccagccagccagccagccagccagccagccagccagc < 1:676454‑M1/12‑1 (MQ=255) attagatttcacagccagccagccagccagccagccagccagccagccag < 1:2330639‑M1/11‑1 (MQ=255) aCTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagc > 1:5520846/1‑51 (MQ=255) ttCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagcca < 1:7014120/51‑1 (MQ=255) tagatttcacagccagccagccagccagccagccagccagtcagccagcca > 1:10519616‑M1/38‑51 (MQ=255) agatttcacagccagccagccagccagccagccagccagccagcc > 1:6082303‑M1/37‑45 (MQ=255) tttcacagccagccagccagccagccagccagccagccagccagcca > 1:2619638‑M1/34‑47 (MQ=255) tttcacagccagccagccagccagccagccagccagccagccagcca > 1:2350634‑M1/34‑47 (MQ=255) aaTATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagcca > 1:8383290/1‑51 (MQ=255) ttcacagccagccagccagccagccagccagccagccagccagccagccag > 1:4408399‑M1/33‑51 (MQ=255) atatAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccag < 1:6907440/51‑1 (MQ=255) atatAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccag < 1:7215416/51‑1 (MQ=255) tcacagccagccagccagccagccagccagccagccagccagccagccagc < 1:10779016‑M1/20‑1 (MQ=255) tcacagccagccagccagccagcaagccagccagccagccagccagccagc < 1:10797193‑M1/20‑1 (MQ=255) tataAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagc > 1:3569210/1‑51 (MQ=255) agctagccagccagccagccagccagccagccagccagccagccagccagc < 1:6011477‑M1/20‑1 (MQ=255) ataAAGGGGTGAAATTTGCATTGGATTTCAcagccagccagccagccagcc < 1:34270/51‑1 (MQ=255) ataAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcc > 1:7498030/1‑51 (MQ=255) taAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcca < 1:37568/51‑1 (MQ=255) taAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcca < 1:1437943/51‑1 (MQ=255) taAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcca > 1:10679620/1‑51 (MQ=255) acagccagccagccagccagccagccagccagccagccagccagccagcca < 1:4344694‑M1/22‑1 (MQ=255) acagccagccagccagccagccagccagccagccagccagccagccagcca < 1:10779746‑M1/22‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:1210059‑M1/23‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag > 1:1455202‑M1/29‑51 (MQ=255) agccagccagccagccagccagccagccagccagccagccagccagccagc < 1:8098161‑M1/24‑1 (MQ=255) aaGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagc > 1:2043257/1‑51 (MQ=255) aaGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagc > 1:2938089/1‑51 (MQ=255) aGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagcc < 1:2235846/51‑1 (MQ=255) ggggTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagcc > 1:399735/1‑50 (MQ=255) ccagccagccagccagccagccagccagccagccagcctgccagccagcc > 1:9232791‑M1/26‑50 (MQ=255) ccagccagccagccagccagccagccagccagcca > 1:8856420‑M1/26‑35 (MQ=255) gggTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagccag > 1:2172997/1‑51 (MQ=255) gggTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagccag > 1:7989344/1‑51 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:2323898‑M1/27‑1 (MQ=255) agccagccagccagccagccagccagccagccagccagccagccagccagc < 1:10033960‑M1/28‑1 (MQ=255) agccagccagccagccagccagccagccagccagccagccagccagccagc < 1:9452067‑M1/28‑1 (MQ=255) gccagccagccagccagccagccagccagccagccagccagccagccagcc < 1:6277344‑M1/29‑1 (MQ=255) gTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCc > 1:7019673‑M2/1‑50 (MQ=255) tGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCca > 1:2881518‑M2/1‑49 (MQ=255) tGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCca > 1:9293695‑M2/1‑49 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagccagcca < 1:940143‑M1/30‑1 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagccagcca < 1:3123728‑M1/30‑1 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagccagcc > 1:5541211‑M1/22‑50 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:4726136‑M1/31‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:10287104‑M1/31‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:7505419‑M1/31‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:8408637‑M1/31‑1 (MQ=255) aaTTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagcc > 1:8017115‑M2/1‑46 (MQ=255) aaTTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagcc > 1:9462326‑M2/1‑46 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagcc > 1:9626191‑M1/18‑46 (MQ=255) ccagccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAgg < 1:5757717‑M1/32‑1 (MQ=255) ccagccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGgtg < 1:9028671‑M1/34‑1 (MQ=255) ccagccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGgtg < 1:320766‑M1/34‑1 (MQ=255) aTTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagcca > 1:1536182‑M2/1‑45 (MQ=255) agccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGtgtg < 1:8746804‑M1/36‑1 (MQ=255) gccagccagccagccagccagccagccagccagccagcc > 1:2362698‑M1/15‑39 (MQ=255) gCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagccagcca > 1:68426‑M2/1‑41 (MQ=255) gCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagccagcca > 1:8438738‑M2/1‑41 (MQ=255) ccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGaa < 1:1611772‑M1/38‑1 (MQ=255) agccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAAtg < 1:2020424‑M1/40‑1 (MQ=255) aTTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagccagccagc < 1:5924014‑M2/51‑13 (MQ=255) ttAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagccagccagcc < 1:8938792‑M2/51‑14 (MQ=255) ttAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagccagccagc < 1:6427373‑M2/50‑13 (MQ=255) gccagccagccagccagccagccagccagccagccagcc > 1:2778787‑M1/11‑39 (MQ=255) cagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTgg > 1:1887754‑M1/9‑51 (MQ=255) agccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGa < 1:8586524‑M1/44‑1 (MQ=255) gccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTgg > 1:1488531‑M1/7‑49 (MQ=255) gccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAt < 1:10226633‑M1/45‑1 (MQ=255) aTTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagccagccagccagcc < 1:6392701‑M2/51‑18 (MQ=255) tCACAGCCAGCCAGCCAGCCAGCCAGCCAGCcagccagccagccagccagc < 1:1571044‑M2/51‑21 (MQ=255) agcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAtttt < 1:3096368‑M1/48‑1 (MQ=255) agcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAtttt > 1:4446360‑M1/4‑51 (MQ=255) agcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAtt > 1:6834078‑M1/4‑49 (MQ=255) CAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTa < 1:608502‑M1/51‑1 (MQ=255) | CTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTA > REL606/2103838‑2103938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |