| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 588495 = | NA (NA) | 185 (2.050) | 70/76 | NT | NA | noncoding (1/1977 nt) | IS150 | repeat region |
| ? | REL606 | 589936 = | NA (NA) | noncoding (387/768 nt) | IS1 | repeat region | |||||
Only 100 of 618 total aligned reads displayed.
GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/588546‑588495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC > REL606/589936‑589985 gatATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:2369479/4‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:4204703/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:4086929/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:2001955/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:10448479/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:7820412/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:7912618/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:8138340/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:8199671/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:2540186/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:8376187/51‑1GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:9011273/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:1408321/1‑51GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:4832744/51‑1 ANATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:718863/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:8232540/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:1275248/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:6985569/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:5352591/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:506460/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:10779596/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:856344/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:4893890/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:9331318/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:1460154/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:2416467/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:4613985/1‑51 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:1204436/51‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:4133695/51‑1 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAC < 1:10261230/51‑1 CATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAC < 1:3708292/51‑1 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACT > 1:9458258/1‑51 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACT > 1:9711247/1‑51 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTc < 1:2949651/51‑2 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTc < 1:8484961/51‑2 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTG < 1:2284219/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTG < 1:4761857/51‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGT < 1:1777397/51‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGT > 1:1535794/1‑51 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGT < 1:9546930/51‑1 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTC < 1:4522218/51‑1 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTC > 1:3032972/1‑51 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCG < 1:7058564/51‑1 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCG > 1:8907557/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGAGCAGTACACTGTTCGTC > 1:8759621/1‑51 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCC > 1:3218164/1‑51 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCAT < 1:6347950/51‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTT > 1:8059207/1‑51 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTT > 1:1855054/1‑51 TTCCATTTCATCGTCCAACAAAATGTTTGCAGTACACTGTTCGTCCATTTC < 1:6101844/51‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCC > 1:9626356/1‑51 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCG > 1:2867187/1‑51 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCG < 1:1924095/51‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCG > 1:5712032/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGC > 1:3144755/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGC > 1:5564804/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGC > 1:590663/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCA > 1:10000347/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACACCGTTCGTCCATTTCCGCGCA > 1:4554787/1‑51 CATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGA < 1:7414138/51‑1 ATCGTCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGAC < 1:6565606/51‑1 TCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATG > 1:9914181/1‑51 TCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATG > 1:8684631/1‑51 TCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATG > 1:1312894/1‑51 TCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATG < 1:3840237/51‑1 TCCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAG < 1:5629830/45‑1 CCAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGA > 1:3504853/1‑51 CAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGAC < 1:2106152/51‑1 CAACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGAC > 1:7324660/1‑51 ACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGT < 1:2139820/51‑1 ACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGT < 1:1011910/51‑1 ACAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGT < 1:7566265/51‑1 CAAAATGGGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTC < 1:2768603/51‑1 GGTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCC < 1:6192846/51‑1 GTGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCG < 1:7475662/51‑1 TGCAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGG < 1:528674/51‑1 CAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCT < 1:4421628/51‑1 CAGTACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCT > 1:5460890/1‑51 TACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTA < 1:247002/51‑1 ACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTAT < 1:1708686/51‑1 ACACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTAT > 1:6874773/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:9787771/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:4304306/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG < 1:10370992/51‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG < 1:3933741/51‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG < 1:10655133/51‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:8625309/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:5186775/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG < 1:1798505/51‑1 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:10723397/1‑51 CACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATG > 1:9089573/1‑51 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:397416/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:10902840/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:2706256/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:9509568/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:7732761/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:3288239/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:8299103/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC < 1:8258724/51‑1 ACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC > 1:6732234/1‑51 GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/588546‑588495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGC > REL606/589936‑589985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |