| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC | REL606 | 1,609,175 | Δ7,554 bp | between IS3 | ybcW–[ECB_01526] | ybcW, gnsB, ynfN, ECB_01516, cspI, ydfP, ydfQ, ydfR, essQ, ECB_01522, ECB_01523, insE‑4, insF‑4, [ECB_01526] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1607946–1609176 | 1616697–1615469 | 6294–8752 | 34 [32] | [31] 33 | insE‑3–[insF‑4] | insE‑3,insF‑3,ybcW,gnsB,ynfN,ECB_01516,cspI,ydfP,ydfQ,ydfR,essQ,ECB_01522,ECB_01523,insE‑4,[insF‑4] |
AACCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACATA > REL606/1616681‑1616748 | aaCCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCatat > 1:3460185/1‑51 (MQ=35)aaCCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCatat > 1:1437655/1‑51 (MQ=35)aaCCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCatat < 1:5507979/51‑1 (MQ=35) aCCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAtata > 1:3535177/1‑51 (MQ=38) aCCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAtata > 1:6999224/1‑51 (MQ=38) ccAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAg > 1:488449/1‑51 (MQ=40) cAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGc < 1:6939174/51‑1 (MQ=255) cAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGc > 1:241950/1‑51 (MQ=255) aCCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCAtt < 1:3894363/51‑1 (MQ=255) aCCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCAtt > 1:12492/1‑51 (MQ=255) ccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCAttt < 1:4166182/51‑1 (MQ=255) cTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTc > 1:1362767/1‑51 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTcc > 1:1811803/1‑51 (MQ=255) cGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCg > 1:4143757/1‑51 (MQ=255) gCTTAGGCCTGTGTCCATATTTCGTGGGTAGGATCATATAGCCATTTCCgg < 1:4210579/51‑1 (MQ=255) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCgg < 1:6787652/51‑1 (MQ=255) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCgg > 1:3008029/1‑51 (MQ=255) cTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGa > 1:1829354/1‑51 (MQ=255) cTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGa < 1:3412739/51‑1 (MQ=255) cTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGa > 1:2800713/1‑51 (MQ=255) ttAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGAc < 1:433552/51‑1 (MQ=255) ttAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGAc > 1:4394711/1‑51 (MQ=255) ttAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGAc > 1:4112864/1‑51 (MQ=255) ttAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGAc > 1:6930164/1‑51 (MQ=255) ttAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGAc > 1:5281342/1‑51 (MQ=255) tAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGAc > 1:1607412/1‑50 (MQ=255) tAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACa > 1:5857603/1‑51 (MQ=255) tAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACa < 1:3926251/51‑1 (MQ=255) aGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACAt > 1:4891681/1‑51 (MQ=255) aGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACAt < 1:100320/51‑1 (MQ=255) aGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACAt < 1:2511086/51‑1 (MQ=255) ggCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACATa < 1:7109440/51‑1 (MQ=255) ggCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACATa < 1:926809/51‑1 (MQ=255) | AACCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCCATTTCCGGACATA > REL606/1616681‑1616748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |