| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC | REL606 | 1,609,175 | Δ7,554 bp | between IS3 | ybcW–[ECB_01526] | ybcW, gnsB, ynfN, ECB_01516, cspI, ydfP, ydfQ, ydfR, essQ, ECB_01522, ECB_01523, insE‑4, insF‑4, [ECB_01526] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1607946–1609176 | 1616697–1615469 | 6294–8752 | 34 [32] | [31] 33 | insE‑3–[insF‑4] | insE‑3,insF‑3,ybcW,gnsB,ynfN,ECB_01516,cspI,ydfP,ydfQ,ydfR,essQ,ECB_01522,ECB_01523,insE‑4,[insF‑4] |
GGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTC > REL606/1607895‑1607964 | ggcgTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACAcgcg > 1:6298067/1‑51 (MQ=255)ggcgTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACAcgcg < 1:6351972/51‑1 (MQ=255) gcgTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCgg < 1:6710553/51‑1 (MQ=255) gTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCt > 1:4729443/1‑51 (MQ=255) gTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCt > 1:6518838/1‑51 (MQ=255) gTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCt < 1:1921301/51‑1 (MQ=255) gTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCt > 1:3571287/1‑51 (MQ=255) gTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCt > 1:3433018/1‑51 (MQ=255) ggCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTaa < 1:4610407/51‑1 (MQ=255) gCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAg > 1:825524/1‑51 (MQ=255) ggTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTg < 1:5500780/51‑1 (MQ=255) ggTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTg < 1:5397337/51‑1 (MQ=255) ggTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTg > 1:4317886/1‑51 (MQ=255) gTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGa < 1:4113134/51‑1 (MQ=255) gTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGa > 1:6561361/1‑51 (MQ=255) gTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGa < 1:149645/51‑1 (MQ=255) ttATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAg > 1:3695084/1‑51 (MQ=255) ttATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAg < 1:5711307/51‑1 (MQ=255) ttATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAg > 1:4999067/1‑51 (MQ=255) ttATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAg > 1:924317/1‑51 (MQ=255) aTCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAg > 1:7136630/1‑49 (MQ=255) aTCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTa < 1:3828978/51‑1 (MQ=255) aTCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTa < 1:5186360/51‑1 (MQ=255) aTCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTa < 1:6331729/51‑1 (MQ=255) tCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTaa > 1:3373158/1‑51 (MQ=255) tCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTaa > 1:220701/1‑51 (MQ=255) cTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTaaa < 1:5739874/51‑1 (MQ=255) tGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAc > 1:4283595/1‑51 (MQ=38) tGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAc > 1:2951008/1‑51 (MQ=38) tGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAc < 1:881922/51‑1 (MQ=40) gAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAct < 1:3266065/51‑1 (MQ=38) aaaaTTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAActc > 1:2283640/1‑51 (MQ=35) aaaaTTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAActc > 1:3613904/1‑51 (MQ=35) aaTTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACtctc < 1:2261999/51‑1 (MQ=31) | GGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTC > REL606/1607895‑1607964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |