| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,981,782 | IS150 (–) +3 bp | coding (249‑251/1224 nt) | ECB_03710 ← | putative permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 78 (0.980) | 49/100 | 0.4 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3981782 = | 0 (0.000) | coding (251/1224 nt) | ECB_03710 | putative permease | |||||
| * | ? | REL606 | = 3894996 | NA (NA) | 120 (1.540) | 60/98 | 0.0 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 3981784 | 0 (0.000) | coding (249/1224 nt) | ECB_03710 | putative permease | |||||
Only 100 of 206 total aligned reads displayed.
CAGCCGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCTTTTTC > REL606/3981734‑3981834 | aGCCGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTt < 1:1725153‑M2/51‑2 (MQ=255) ccGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgt < 1:121820‑M2/51‑4 (MQ=255) cGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgta < 1:6622954‑M2/51‑5 (MQ=255) cGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgta > 1:667200‑M2/1‑47 (MQ=255) aaCAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtact < 1:644394‑M2/51‑7 (MQ=255) aaCAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtact > 1:4253295‑M2/1‑45 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCaa < 1:752004‑M2/10‑1 (MQ=255) aCAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactg > 1:4529591‑M2/1‑44 (MQ=255) cAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactga < 1:4820462‑M2/51‑9 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACg > 1:2883724‑M2/39‑51 (MQ=255) aCTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccc > 1:6203201‑M2/1‑40 (MQ=255) aCTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccc < 1:505006‑M2/51‑12 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGaa < 1:703162‑M2/15‑1 (MQ=255) ttATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgacccca < 1:1551048‑M2/51‑14 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAat < 1:4984620‑M2/16‑1 (MQ=255) tATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaa < 1:6944518‑M2/51‑15 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAatat > 1:1026096‑M2/34‑51 (MQ=255) aTCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaa > 1:2564835‑M2/1‑36 (MQ=255) cGCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaa < 1:7275319‑M2/51‑18 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTc > 1:1355753‑M2/31‑51 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTc < 1:2160372‑M2/21‑1 (MQ=255) gCCATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaag < 1:2090063‑M2/51‑19 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTca > 1:1798648‑M2/30‑51 (MQ=255) ccATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagt > 1:6869295‑M2/1‑32 (MQ=255) catcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTcac > 1:3321956‑M2/29‑51 (MQ=255) cATCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagtt < 1:4154528‑M2/51‑21 (MQ=255) atcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTcaca < 1:2449173‑M2/24‑1 (MQ=255) aTCAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttg > 1:5084330‑M2/1‑30 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACaa > 1:4910820‑M2/27‑51 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACaa < 1:5527431‑M2/25‑1 (MQ=255) cgtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAAt > 1:5541997‑M2/26‑51 (MQ=255) cAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttgga < 1:543386‑M2/51‑24 (MQ=255) cAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttgga > 1:2961233‑M2/1‑28 (MQ=255) cAAAATGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttgga < 1:5069949‑M2/51‑24 (MQ=255) gtccaacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATg < 1:2136331‑M2/27‑1 (MQ=255) aaaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggaca > 1:3840562‑M2/1‑26 (MQ=255) aaaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggaca > 1:5870130‑M2/1‑26 (MQ=255) aaaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggaca > 1:705574‑M2/1‑26 (MQ=255) aaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacag < 1:5951194‑M2/51‑27 (MQ=255) aaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacag < 1:1324277‑M2/51‑27 (MQ=255) aaTGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacag > 1:3154334‑M2/1‑25 (MQ=255) caacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCa > 1:4294239‑M2/22‑51 (MQ=255) tGTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagtt < 1:6264235‑M2/51‑29 (MQ=255) aacaaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCAt > 1:4430487‑M2/21‑51 (MQ=255) gTTAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagtta > 1:6409836‑M2/1‑22 (MQ=255) ttAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaa < 1:3986156‑M2/51‑31 (MQ=255) caaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATAc < 1:6487970‑M2/33‑1 (MQ=255) tAATGGCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaa < 1:2741923‑M2/51‑32 (MQ=255) aaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACg < 1:345536‑M2/34‑1 (MQ=255) aaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACg > 1:6548661‑M2/18‑51 (MQ=255) aaaatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACg > 1:1141316‑M2/18‑51 (MQ=255) aatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGtt < 1:3392499‑M2/36‑1 (MQ=255) aatgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGtt > 1:6098500‑M2/16‑51 (MQ=255) atgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTg > 1:3765694‑M2/15‑51 (MQ=255) atgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTg < 1:6575427‑M2/37‑1 (MQ=255) tgggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTgg > 1:5197984‑M2/14‑51 (MQ=255) ggCGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacg > 1:4467226‑M2/1‑16 (MQ=255) gggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGc > 1:3732813‑M2/13‑51 (MQ=255) gggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGc > 1:3355650‑M2/13‑51 (MQ=255) ggtgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCa < 1:1919408‑M2/40‑1 (MQ=255) cGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgag > 1:2424925‑M2/1‑14 (MQ=255) cGATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgag < 1:3614277‑M2/51‑38 (MQ=255) gATGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgagg < 1:3557434‑M2/51‑39 (MQ=255) tgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAgg < 1:2263320‑M2/42‑1 (MQ=255) tgcagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAgg > 1:5709727‑M2/10‑51 (MQ=255) aTGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggc > 1:2047270‑M2/1‑12 (MQ=255) aTGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:170‑M2/51‑40 (MQ=255) tGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggca < 1:5258169‑M2/51‑41 (MQ=255) tGGCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggca < 1:6316447‑M2/51‑41 (MQ=255) ggCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcat < 1:1829448‑M2/51‑42 (MQ=255) cagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCg > 1:6609884‑M2/8‑51 (MQ=255) cagtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCg > 1:5311792‑M2/8‑51 (MQ=255) gCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcata > 1:7204086‑M2/1‑9 (MQ=255) gCCCCTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcata < 1:54975‑M2/51‑43 (MQ=255) agtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCgg > 1:107562‑M2/7‑51 (MQ=255) agtacaTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCgg > 1:6129043‑M2/7‑51 (MQ=255) cccTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatata > 1:537370‑M2/1‑7 (MQ=255) ccTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:1682205‑M2/1‑6 (MQ=255) caTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCtt < 1:2374255‑M2/49‑1 (MQ=255) cTTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:6064772‑M2/51‑47 (MQ=255) tttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggt < 1:7084381‑M2/51‑48 (MQ=255) tttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggt < 1:5598993‑M2/51‑48 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:3927485‑M2/1‑3 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:2619641‑M2/1‑3 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:1157099‑M2/51‑49 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:4754355‑M2/1‑3 (MQ=255) ttttgtactgaccccaaaaagttggacagttaaacacgaggcatata < 1:6963847‑M2/47‑45 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:6839221‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:3133107‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:1675030‑M2/1‑2 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:3181730‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:833919‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:4650009‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:4052232‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:4175173‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:2773449‑M2/51‑50 (MQ=255) tttgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:7259700‑M2/1‑2 (MQ=255) tttgaactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 1:2180514‑M2/51‑50 (MQ=255) tttCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCttttt < 1:7122841/51‑1 (MQ=255) tttCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCttttt < 1:1626778/51‑1 (MQ=255) | CAGCCGAACAGACTTATCGCCATCAAAATGTTAATGGCGATGGCCCCTTTTTCGCCAAACGAATATTTCACAATGCCATACGTTGGCAGGCGGGCTTTTTC > REL606/3981734‑3981834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |