| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3651091 = | NA (NA) | 114 (1.430) | 63/100 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4047675 | 0 (0.000) | coding (874/927 nt) | yihR | predicted aldose‑1‑epimerase | |||||
Only 100 of 117 total aligned reads displayed.
TTTTCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCCAGTAATAATAAGTCGATACCTGAATTAAAGGCGTTAGGCGGGCAACTC > REL606/4047625‑4047724 | ttttCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTc > 1:3516067/1‑51 (MQ=255)ttttCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTc < 1:3263420/51‑1 (MQ=255) tttCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCt > 1:1598401‑M2/1‑50 (MQ=255) ttCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtg < 1:3252728‑M2/51‑3 (MQ=255) ttCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtg < 1:5224748‑M2/51‑3 (MQ=255) ctctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgta > 1:1632131‑M2/1‑47 (MQ=255) ctctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgta > 1:908885‑M2/1‑47 (MQ=255) ctctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgta < 1:6177042‑M2/51‑5 (MQ=255) tctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtac < 1:6624362‑M2/51‑6 (MQ=255) ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact < 1:4458489‑M2/51‑7 (MQ=255) ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact > 1:3936267‑M2/1‑45 (MQ=255) ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact > 1:5026368‑M2/1‑45 (MQ=255) ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact < 1:4078279‑M2/51‑7 (MQ=255) ctGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtact > 1:4478603‑M2/1‑45 (MQ=255) gTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgc > 1:739914‑M2/1‑43 (MQ=255) gTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgc < 1:3506959‑M2/51‑9 (MQ=255) tCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgca < 1:6971492‑M2/51‑10 (MQ=255) tCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgca > 1:1388947‑M2/1‑42 (MQ=255) tCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgca < 1:1977026‑M2/51‑10 (MQ=255) ccGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcac < 1:2322863‑M2/51‑11 (MQ=255) cGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacc < 1:2575181‑M2/51‑12 (MQ=255) gTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcaccc > 1:1757655‑M2/1‑39 (MQ=255) tAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcaccca < 1:2507436‑M2/51‑14 (MQ=255) aaaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccat > 1:6582731‑M2/1‑37 (MQ=255) aaaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccat > 1:3060397‑M2/1‑37 (MQ=255) aaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatt < 1:2963329‑M2/51‑16 (MQ=255) aaTATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatt > 1:1667684‑M2/1‑36 (MQ=255) atatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattt < 1:4896577‑M2/51‑17 (MQ=255) atatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattt < 1:1832214‑M2/51‑17 (MQ=255) tatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatttt > 1:958718‑M2/1‑34 (MQ=255) tatTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccatttt > 1:4295117‑M2/1‑34 (MQ=255) atTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttg > 1:2035672‑M2/1‑33 (MQ=255) atTAAAAAACAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttg < 1:2795272‑M2/51‑19 (MQ=255) atTAAAAAACAGGCGGTGCGGTTTTCCCGATTCtgtactgcacccattttg > 1:5571591‑M2/1‑33 (MQ=255) aaaaaaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttg < 1:3000109‑M2/51‑22 (MQ=255) aaaaaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttgg > 1:5586901‑M2/1‑29 (MQ=255) aaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacg > 1:2265415‑M2/1‑26 (MQ=255) aaCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacg < 1:1335976‑M2/51‑26 (MQ=255) aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga < 1:5697691‑M2/51‑27 (MQ=255) aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga < 1:1072872‑M2/51‑27 (MQ=255) aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga > 1:622009‑M2/1‑25 (MQ=255) aCAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacga < 1:6465050‑M2/51‑27 (MQ=255) cAGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacgat < 1:3089066‑M2/51‑28 (MQ=255) aGGCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacgatg > 1:4396906‑M2/1‑23 (MQ=255) ggCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggacgatga > 1:2959314‑M2/1‑22 (MQ=255) ggCGGTGCGGTTTTCCTGATTCtgtactgcacccattttgttggac > 1:1469673‑M2/1‑22 (MQ=255) cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa > 1:6283684‑M2/1‑20 (MQ=255) cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa > 1:4015650‑M2/1‑20 (MQ=255) cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa > 1:2834302‑M2/1‑20 (MQ=255) cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa < 1:6046621‑M2/51‑32 (MQ=255) cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa > 1:6878884‑M2/1‑20 (MQ=255) cggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaa < 1:4039446‑M2/51‑32 (MQ=255) ggtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaat > 1:4311743‑M2/1‑19 (MQ=255) gtgcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatg > 1:6280341‑M2/1‑18 (MQ=255) tgcagtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatgg > 1:2753882‑M2/1‑17 (MQ=255) gcggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatgga > 1:2310513‑M2/1‑16 (MQ=255) cggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaa > 1:413444‑M2/1‑15 (MQ=255) ggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaat < 1:6326803‑M2/51‑38 (MQ=255) ggtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaat < 1:2948214‑M2/51‑38 (MQ=255) gtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaata > 1:621790‑M2/1‑13 (MQ=255) gtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaata > 1:5055481‑M2/1‑13 (MQ=255) gtTTTCCTGATTCtgtactgcacccattttgttggacgatgaaatggaata > 1:1340951‑M2/1‑13 (MQ=255) tttCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagc < 1:3314399‑M2/51‑41 (MQ=255) tttCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagc > 1:6915339‑M2/1‑11 (MQ=255) tttCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagc < 1:4092879‑M2/51‑41 (MQ=255) tCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagccc < 1:5543367‑M2/51‑43 (MQ=255) tCCTGATTCtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:184970‑M2/1‑9 (MQ=255) tGATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:2257957‑M2/1‑6 (MQ=255) tGATTCtgtactgcacccattttgttggacgatgaaatggaatagccccta > 1:2188985‑M2/1‑6 (MQ=255) gATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:5887359‑M2/51‑47 (MQ=255) gATTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:1159193‑M2/1‑5 (MQ=255) aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:1213918‑M2/1‑4 (MQ=255) aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:6862280‑M2/1‑4 (MQ=255) aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:2655954‑M2/1‑4 (MQ=255) aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:2504675‑M2/51‑48 (MQ=255) aTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:715164‑M2/1‑4 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:2297803‑M2/1‑3 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:5972523‑M2/51‑49 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:5313739‑M2/51‑49 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:5286834‑M2/51‑49 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:1170416‑M2/1‑3 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:3755531‑M2/51‑49 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:5085047‑M2/51‑49 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:845498‑M2/1‑3 (MQ=255) ttCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:2509171‑M2/51‑49 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:6174827‑M2/51‑50 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:4683639‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:38119‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:1040700‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:3489650‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:976331‑M2/51‑50 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:2381813‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:2151302‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:1884652‑M2/51‑50 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:7243216‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:183711‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:1619378‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:1548740‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:1214249‑M2/1‑2 (MQ=255) tCtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:2698353‑M2/1‑2 (MQ=255) | TTTTCTCTGTCCGTAAATATTAAAAAACAGGCGGTGCGGTTTTCCTGATTCCAGTAATAATAAGTCGATACCTGAATTAAAGGCGTTAGGCGGGCAACTC > REL606/4047625‑4047724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |