| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3651091 = | NA (NA) | 114 (1.430) | 63/100 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4047675 | 0 (0.000) | coding (874/927 nt) | yihR | predicted aldose‑1‑epimerase | |||||
Only 100 of 114 total aligned reads displayed.
ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3651139‑3651091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAA < REL606/4047675‑4047626 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:1040700/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA < 1:976331/51‑1ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:7243216/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:4683639/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:38119/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:1214249/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:3489650/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:2151302/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA < 1:1884652/51‑1ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:183711/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:1548740/1‑51ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:1619378/1‑51 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAA < 1:5313739/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAA > 1:845498/1‑51 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAA < 1:5972523/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAA < 1:2509171/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAA > 1:2297803/1‑51 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAA < 1:5286834/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAA > 1:1170416/1‑51 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAA < 1:5085047/51‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGA > 1:2698353/1‑50 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAAT > 1:1213918/1‑51 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAAT < 1:2504675/51‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAAT > 1:6862280/1‑51 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAAT > 1:2655954/1‑51 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATC < 1:5887359/51‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATC > 1:1159193/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCA > 1:2257957/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCA > 1:2188985/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCA > 1:4772509/1‑51 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGG < 1:3873982/51‑1 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGA > 1:184970/1‑51 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAA < 1:4092879/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAA > 1:6915339/1‑51 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAA < 1:3314399/51‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAA < 1:6241495/51‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAAC > 1:621790/1‑51 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAAC > 1:5055481/1‑51 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACC < 1:2948214/51‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACC < 1:6326803/51‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCG > 1:413444/1‑51 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGC > 1:2310513/1‑51 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACTGCA > 1:2753882/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCAC > 1:6280341/1‑51 ATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACC > 1:4311743/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG > 1:6283684/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG > 1:6878884/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG < 1:4039446/51‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG < 1:6046621/51‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG > 1:2834302/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG > 1:4015650/1‑51 TCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCC > 1:2959314/1‑51 CATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCT > 1:4396906/1‑51 ATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTG < 1:3089066/51‑1 TCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGT < 1:1072872/51‑1 TCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGT < 1:5697691/51‑1 TCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGT > 1:622009/1‑51 CGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTT < 1:1335976/51‑1 CGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTT > 1:2265415/1‑51 GTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTT < 1:5299056/51‑1 GTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCC > 1:1469673/1‑46 TCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTT > 1:3356116/1‑51 CCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTT < 1:1617259/51‑1 CCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTT > 1:5586901/1‑51 CAAAATGGGTGCAGTACAGAATCGGGAAAACCGCACCGCCTGTTTTTTAAT > 1:5571591/1‑51 CAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAAT < 1:2795272/51‑1 AAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATA > 1:4295117/1‑51 AAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATA > 1:958718/1‑51 AAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATA > 1:1333379/1‑51 AAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATAT < 1:1832214/51‑1 AATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATT < 1:2963329/51‑1 ATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTT > 1:6582731/1‑51 ATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTT > 1:3060397/1‑51 TGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTA < 1:6795023/51‑1 TGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTA < 1:2507436/51‑1 GGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTAC < 1:2454374/51‑1 GGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTAC > 1:1757655/1‑51 GGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACG < 1:2575181/51‑1 GTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGG < 1:2322863/51‑1 TGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGA < 1:6971492/51‑1 TGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGA > 1:1388947/1‑51 TGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGA < 1:1977026/51‑1 GCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGAC < 1:3506959/51‑1 GCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGAC > 1:739914/1‑51 CAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACA < 1:2976320/51‑1 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG < 1:4078279/51‑1 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG > 1:3936267/1‑51 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG < 1:4458489/51‑1 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG > 1:5026368/1‑51 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG > 1:4478603/1‑51 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATT < 1:5954874/42‑1 GTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGA < 1:6624362/51‑1 TACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAG < 1:6177042/51‑1 TACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAG > 1:1632131/1‑51 TACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAG > 1:908885/1‑51 ACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGA < 1:7263487/51‑1 ACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGA > 1:1848988/1‑51 CAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAA < 1:3252728/51‑1 CAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAA < 1:5224748/51‑1 AGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAA > 1:1598401/1‑51 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3651139‑3651091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAA < REL606/4047675‑4047626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |