| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,462,266 | IS150 (+) +3 bp | intergenic (‑28/‑311) | mokB ← / → trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 65 (0.820) | 44/100 | 0.6 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1462266 = | 0 (0.000) | intergenic (‑28/‑313) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor | |||||
| * | ? | REL606 | = 1462268 | 0 (0.000) | 92 (1.150) | 57/100 | 0.1 | 100% | intergenic (‑30/‑311) | mokB/trg | regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 157 total aligned reads displayed.
AAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTC > REL606/1462216‑1462316 | aaGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATAtcg < 1:2804126/51‑1 (MQ=255)aaGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATAtcg < 1:5282967/51‑1 (MQ=255) aGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATAtcgg > 1:4795152/1‑51 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGt < 1:5556312‑M2/3‑1 (MQ=255) aTCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTt < 1:4933527‑M1/51‑2 (MQ=255) tCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtg > 1:682524‑M1/1‑49 (MQ=255) tCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtg < 1:1061725‑M1/51‑3 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGTCgg > 1:5673219‑M2/46‑51 (MQ=255) cTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgt < 1:6135321‑M1/51‑4 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaGGTCggg < 1:2463598‑M2/7‑1 (MQ=255) tGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgta < 1:5431768‑M1/51‑5 (MQ=255) gAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtac > 1:3978805‑M1/1‑46 (MQ=255) gAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtac > 1:2530019‑M1/1‑46 (MQ=255) gAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtac > 1:1158710‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaGGTCgggg > 1:1316541‑M2/44‑51 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg < 1:4893961‑M1/51‑8 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg < 1:178656‑M1/51‑8 (MQ=255) aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactg > 1:6635807‑M1/1‑44 (MQ=255) tGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgca > 1:4610541‑M1/1‑42 (MQ=255) tGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgca > 1:2119349‑M1/1‑42 (MQ=255) gCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcac < 1:329798‑M1/51‑11 (MQ=255) gCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcac < 1:6714284‑M1/51‑11 (MQ=255) gCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcac < 1:5941118‑M1/51‑11 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTc < 1:5172506‑M2/13‑1 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCg > 1:2757706‑M2/38‑51 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc < 1:5621187‑M1/51‑13 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc > 1:1506925‑M1/1‑39 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc < 1:4058220‑M1/51‑13 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcaccc > 1:7153157‑M1/1‑39 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTc > 1:3128706‑M2/36‑51 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCt > 1:4399579‑M2/35‑51 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCt > 1:4792797‑M2/35‑51 (MQ=255) ggTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccat > 1:4776463‑M1/1‑37 (MQ=255) tgtttaactgtccaactttttggggtcagtacaGGTCgg > 1:3943575‑M2/34‑39 (MQ=255) tgtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCtt > 1:4733103‑M2/34‑51 (MQ=255) gTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatt < 1:5392837‑M1/51‑16 (MQ=255) ttCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattt > 1:4211690‑M1/1‑35 (MQ=255) gtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCttt < 1:5151653‑M2/19‑1 (MQ=255) gtttaactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCttt > 1:1274714‑M2/33‑51 (MQ=255) tCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatttt > 1:6296664‑M1/1‑34 (MQ=255) tCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatttt > 1:3569578‑M1/1‑34 (MQ=255) tCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatttt > 1:5477786‑M1/1‑34 (MQ=255) tCATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccatttt > 1:6154789‑M1/1‑34 (MQ=255) cATTCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttg < 1:2034107‑M1/51‑19 (MQ=255) ttCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgtt < 1:1918390‑M1/51‑21 (MQ=255) aactgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGa < 1:3701583‑M2/23‑1 (MQ=255) tCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttg < 1:1715391‑M1/51‑22 (MQ=255) tCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttg > 1:6927498‑M1/1‑30 (MQ=255) tCGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttg < 1:1817100‑M1/51‑22 (MQ=255) actgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAt < 1:4280930‑M2/24‑1 (MQ=255) actgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAt < 1:4748346‑M2/24‑1 (MQ=255) actgtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAt < 1:3882606‑M2/24‑1 (MQ=255) cGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttgg > 1:6465231‑M1/1‑29 (MQ=255) cGTTGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttgg > 1:3519704‑M1/1‑29 (MQ=255) ttGGCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggac < 1:6481312‑M1/51‑25 (MQ=255) gtccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGAtt > 1:4689605‑M2/25‑49 (MQ=255) ggCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacga > 1:1911874‑M1/1‑25 (MQ=255) ggCCTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacga < 1:5695373‑M1/51‑27 (MQ=255) ccaactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCg < 1:41439‑M2/29‑1 (MQ=255) caactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCgg < 1:1194996‑M2/30‑1 (MQ=255) ccTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatg < 1:1559972‑M1/51‑29 (MQ=255) aactttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGt < 1:5565317‑M2/31‑1 (MQ=255) cTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatga > 1:5457133‑M1/1‑22 (MQ=255) cTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatga < 1:5062794‑M1/51‑30 (MQ=255) cTCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatga < 1:3762054‑M1/51‑30 (MQ=255) actttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGtt < 1:1050471‑M2/32‑1 (MQ=255) actttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGtt < 1:890929‑M2/32‑1 (MQ=255) tCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaa > 1:1787305‑M1/1‑21 (MQ=255) tCGGTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaa > 1:183208‑M1/1‑21 (MQ=255) ctttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTccc > 1:295242‑M2/19‑46 (MQ=255) ctttttggggtcagcacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTa < 1:5289615‑M2/33‑1 (MQ=255) tttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCg > 1:3877046‑M2/18‑46 (MQ=255) tttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAg < 1:4586973‑M2/34‑1 (MQ=255) tttttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAg > 1:3182486‑M2/18‑51 (MQ=255) tttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGcc > 1:3605356‑M2/16‑51 (MQ=255) tttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGcc > 1:3996745‑M2/16‑51 (MQ=255) gTTGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatg < 1:5045987‑M1/51‑34 (MQ=255) ttggggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCt < 1:5328095‑M2/37‑1 (MQ=255) ttGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgg < 1:3342013‑M1/51‑35 (MQ=255) tGATAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatgga > 1:5193167‑M1/1‑16 (MQ=255) gggtcagtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGaa < 1:6769974‑M2/40‑1 (MQ=255) tAGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaata < 1:6628560‑M1/51‑39 (MQ=255) aGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatag > 1:2359060‑M1/1‑12 (MQ=255) aGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatag > 1:267991‑M1/1‑12 (MQ=255) aGAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatag > 1:5317825‑M1/1‑12 (MQ=255) gAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatagc < 1:3168490‑M1/51‑41 (MQ=255) gAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:796506‑M1/1‑11 (MQ=255) gAAATATCGGTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:3757549‑M1/1‑11 (MQ=255) aaaTATCGGTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:654939‑M1/1‑10 (MQ=255) gtacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGa < 1:2099470‑M2/46‑1 (MQ=255) tatCGGTtgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:3243146‑M1/1‑7 (MQ=255) tacaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaa > 1:3470149‑M2/5‑51 (MQ=255) acaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaaa > 1:4646907‑M2/4‑51 (MQ=255) acaGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGaaa < 1:6967420‑M2/48‑1 (MQ=255) tCGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:4080531‑M1/1‑5 (MQ=255) tCGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa < 1:5766118‑M1/51‑47 (MQ=255) cGGTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:4267175‑M1/51‑48 (MQ=255) aGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGt > 1:5946809‑M2/2‑51 (MQ=255) ggTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:2307253‑M1/1‑3 (MQ=255) ggTtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:6545436‑M1/51‑49 (MQ=255) | AAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTC > REL606/1462216‑1462316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |