Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 1,462,266 IS150 (+) +3 bp intergenic (‑28/‑311) mokB ← / → trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 666130NA (NA)65 (0.820) 44/100 0.6 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 1462266 = 0 (0.000)intergenic (‑28/‑313) mokB/trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor
* ? REL606 = 14622680 (0.000)92 (1.150) 57/100 0.1 100% intergenic (‑30/‑311) mokB/trg regulatory peptide/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region

GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/666083‑666130
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGT  >  REL606/1462266‑1462315
                                                                                                  
GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGT                                                 <  1:3856168/51‑1
GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGT                                                 <  1:5556312/51‑1
   CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGG                                              >  1:5673219/1‑51
    TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGG                                             <  1:2463598/51‑1
     ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGG                                            >  1:1316541/1‑51
       ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCC                                          <  1:7123298/51‑1
          CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTC                                       <  1:5172506/51‑1
           CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCG                                      >  1:6051128/1‑51
           CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCG                                      >  1:2757706/1‑51
           CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCG                                      >  1:109028/1‑51
            TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGT                                     <  1:5642050/51‑1
             CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTC                                    >  1:3128706/1‑51
              GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCT                                   >  1:4792797/1‑51
              GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCT                                   >  1:4399579/1‑51
               TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTT                                  >  1:4733103/1‑51
               TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGG                                              >  1:3943575/1‑39
                GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTT                                 >  1:1703011/1‑51
                GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTT                                 >  1:1274714/1‑51
                GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTT                                 <  1:5151653/51‑1
                 TTTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTT                                 >  1:292382/1‑50
                  TTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCT                               >  1:520278/1‑51
                  TTAACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCT                               >  1:5083832/1‑51
                    AACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGA                             <  1:529589/51‑1
                    AACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGA                             >  1:3399792/1‑51
                    AACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGA                             <  1:3701583/51‑1
                     ACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGAT                            <  1:4280930/51‑1
                     ACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGAT                            <  1:3882606/51‑1
                     ACTGTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGAT                            <  1:4748346/51‑1
                        GTCCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATT                           >  1:4689605/1‑49
                          CCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCG                       >  1:5162995/1‑51
                          CCAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCG                       <  1:41439/51‑1
                           CAACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGG                      <  1:1194996/51‑1
                            AACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGT                     <  1:5565317/51‑1
                            AACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGT                     <  1:2263829/51‑1
                             ACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTT                    <  1:1050471/51‑1
                             ACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTT                    <  1:890929/51‑1
                             ACTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTT                    >  1:5928293/1‑51
                              CTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTA                   <  1:6508700/51‑1
                              CTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTA                   <  1:1896365/51‑1
                              CTTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCC                        >  1:295242/1‑46
                              CTTTTTGGGGTCAGCACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTA                   <  1:5289615/51‑1
                               TTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAG                  <  1:4586973/51‑1
                               TTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAG                  >  1:3182486/1‑51
                               TTTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCG                       >  1:3877046/1‑46
                                TTTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGC                 >  1:3224834/1‑51
                                 TTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCC                >  1:2612486/1‑51
                                 TTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCC                >  1:3605356/1‑51
                                 TTTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCC                >  1:3996745/1‑51
                                  TTGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCT               <  1:5328095/51‑1
                                   TGGGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTG              <  1:4110838/51‑1
                                     GGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCTGGTTAGCCTGAA            <  1:2077342/51‑1
                                     GGGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAA            <  1:6769974/51‑1
                                      GGTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAA           <  1:4761045/51‑1
                                       GTCAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAA          <  1:1404886/51‑1
                                         CAGTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACA        >  1:4419095/1‑51
                                           GTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGGCTGAAAACAGA      >  1:3649228/1‑51
                                           GTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGA      <  1:2099470/51‑1
                                           GTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGA      >  1:6370515/1‑51
                                           GTACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGA      >  1:3283918/1‑51
                                            TACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAA     >  1:3470149/1‑51
                                            TACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAA     <  1:6673783/51‑1
                                             ACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAA    <  1:6286899/51‑1
                                             ACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAA    <  1:6967420/51‑1
                                             ACAGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAA    >  1:4646907/1‑51
                                               AGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGT  >  1:5946809/1‑51
                                                                                                  
GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/666083‑666130
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGT  >  REL606/1462266‑1462315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.