| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2103888 = | 45 (0.560) | 58 (0.740) +G |
43/98 | 0.6 | 57.4% | coding (155/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | = 2103918 | 43 (0.540) | coding (185/216 nt) | ECB_01992 | hypothetical protein | |||||
Only 100 of 126 total aligned reads displayed.
TTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTA > REL606/2103839‑2103938 | ttCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTcaca > 1:1104431/1‑51 (MQ=255)ttCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTcaca < 1:3179344/51‑1 (MQ=255)atttgcattagatttcacagccagccagccagccagccagccagccagcca > 1:1536182‑M1/50‑51 (MQ=255) tCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcag > 1:302155/1‑51 (MQ=255) ttgcattagatttcacagccagccagccagccagccagccagccagccagc < 1:6653903‑M1/4‑1 (MQ=255) tgcattagatttcacagccagccagccagccagccagccagccagccagcc < 1:6733595‑M1/5‑1 (MQ=255) tgcattagatttcacagccagccagccagccagccagccagccagccagcc < 1:5408943‑M1/5‑1 (MQ=255) ttATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagcca < 1:5452055/51‑1 (MQ=255) ttATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagcca > 1:3324151/1‑51 (MQ=255) gcattagatttcacagccagccagccagccagccagccagccagccagcca > 1:68426‑M1/46‑51 (MQ=255) gcattagatttcacagccagccagccagccagccagccagccagccagcca < 1:2180324‑M1/6‑1 (MQ=255) tATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccag < 1:5141611/51‑1 (MQ=255) tATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccag > 1:5624678/1‑51 (MQ=255) attagatttcacagccagccagccagccagccagccagccagccagccagc < 1:5924014‑M1/8‑1 (MQ=255) attagatttcacagccagccagccagccagccagccagccagccagccagc < 1:676454‑M1/8‑1 (MQ=255) attagatttcacagccagccagccagccagccagccagccagccagccag < 1:2330639‑M1/7‑1 (MQ=255) ttagatttcacagccagccagccagccagccagccagccagccagccagc < 1:6427373‑M1/8‑1 (MQ=255) agatttcacagccagccagccagccagccagccagccagccagcc > 1:6082303‑M1/41‑45 (MQ=255) cTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagcc > 1:5035747/1‑51 (MQ=255) atttcacagccagccagccagccagccagccagccagccagccagccagcc < 1:6392701‑M1/13‑1 (MQ=255) tttcacagccagccagccagccagccagccagccagccagccagcca > 1:2619638‑M1/38‑47 (MQ=255) ttCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagcca < 1:7014120/51‑1 (MQ=255) ttcacagccagccagccagccagccagccagccagccagccagccagccag > 1:4408399‑M1/37‑51 (MQ=255) tCGAATATAAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccag < 1:5262237/51‑1 (MQ=255) tcacagccagccagccagccagccagccagccagccagccagccagccagc < 1:1571044‑M1/16‑1 (MQ=255) cGAATATAAAGGGGAGAAATTTGCATTAGATTTCAcagccagccagccagc > 1:290211/1‑51 (MQ=255) acagccagccagccagccagccagccagccagccagccagccagccagcca < 1:4344694‑M1/18‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:4312028‑M1/19‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:1210059‑M1/19‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:4732352‑M1/19‑1 (MQ=255) tataAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagc > 1:5538628/1‑51 (MQ=255) tataAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagc > 1:2015504/1‑51 (MQ=255) tataAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagc > 1:3569210/1‑51 (MQ=255) agccagccagccagccagccagccagccagccagccagccagccagccagc < 1:3104268‑M1/20‑1 (MQ=255) agccagccagccagccagccagccagccagccagccagccagccagccagc < 1:6120902‑M1/20‑1 (MQ=255) gccagccagccagccagccagccagccagccagccagccagccagccagcc < 1:302847‑M1/21‑1 (MQ=255) gccagccagccagccagccagccagccagccagccagccagccagccagcc < 1:6277344‑M1/21‑1 (MQ=255) ataAAGGGGTGAAATTTGCATTGGATTTCAcagccagccagccagccagcc < 1:34270/51‑1 (MQ=255) ataAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcc > 1:6005145/1‑51 (MQ=255) ataAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcc > 1:2092794/1‑51 (MQ=255) ataAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcc > 1:3784622/1‑51 (MQ=255) taAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcca < 1:37568/51‑1 (MQ=255) taAAGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagcca < 1:6870857/51‑1 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagccagcc > 1:5541211‑M1/30‑50 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagccagcc > 1:3707266‑M1/30‑50 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagcc > 1:5476020‑M1/30‑46 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag > 1:1455202‑M1/29‑51 (MQ=255) aaaGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccaggtgt > 1:2326935/1‑47 (MQ=255) aaaGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccag < 1:3969609/51‑1 (MQ=255) aaaGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccag < 1:607110/51‑1 (MQ=255) aaGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagc > 1:2938089/1‑51 (MQ=255) aaGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagc > 1:2043257/1‑51 (MQ=255) aGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagcc < 1:2235846/51‑1 (MQ=255) aGGGGTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagcc > 1:2024946/1‑51 (MQ=255) ggggTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagcca < 1:7035901/51‑1 (MQ=255) ggggTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagcc > 1:399735/1‑50 (MQ=255) gggTGAAATTTGCATTAGATTTCAcagccagccagccagccagccagccag > 1:2172997/1‑51 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:4726136‑M1/27‑1 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:1441319‑M1/27‑1 (MQ=255) gccagccagccagccagccagccagccagccagccagcc > 1:2778787‑M1/23‑39 (MQ=255) gTGAAATTTGCATTAGATTTCACagccagccagccagccagccagccagcc > 1:6670078/1‑51 (MQ=255) gTGAAATTTGCATTAGATTTCACagccagccagccagccagccagccagcc < 1:7019673/51‑1 (MQ=255) tGAAATTTGCATTAGATTTCACAgccagccagccagccagccagccagcca < 1:2881518/51‑1 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagccagcca < 1:940143‑M1/30‑1 (MQ=255) ccagccagccagccagccagccagccagccagccagccagccagcc > 1:1591742‑M1/22‑46 (MQ=255) gAAATTTGCATTAGATTTCACAGccggccggccagccagccagccagccag < 1:6131148/51‑1 (MQ=37) gAAATTTGCATTAGATTTCACAGccagccagccagccagccagccagccag > 1:5077591/1‑51 (MQ=255) agccagccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAgg < 1:5545872‑M1/32‑1 (MQ=255) gccagccagccagccagccagccagccagccagccagcc > 1:2362698‑M1/19‑39 (MQ=255) ccagccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAgg < 1:5757717‑M1/32‑1 (MQ=255) ccagccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGgtg < 1:320766‑M1/34‑1 (MQ=255) tttGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccag > 1:2037729‑M2/1‑47 (MQ=255) tGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagcc < 1:5408943‑M2/51‑7 (MQ=255) tGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagcc < 1:6733595‑M2/51‑7 (MQ=255) gccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGa > 1:6994286‑M1/15‑51 (MQ=255) gCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagcca < 1:2180324‑M2/51‑8 (MQ=255) gCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagcca > 1:68426‑M2/1‑44 (MQ=255) ccagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGaa < 1:1611772‑M1/38‑1 (MQ=255) cagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAAt < 1:4664204‑M1/39‑1 (MQ=255) cagccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAAt > 1:930350‑M1/13‑51 (MQ=255) agccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAAtg < 1:2020424‑M1/40‑1 (MQ=255) aTTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagccagc < 1:5924014‑M2/51‑10 (MQ=255) aTTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagccag < 1:2330639‑M2/50‑9 (MQ=255) ttAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagccagc < 1:6427373‑M2/50‑10 (MQ=255) ccagccagccagccagccagccagccagccagccagccag < 1:7246113‑M1/31‑1 (MQ=255) ccagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGaa > 1:6564873‑M1/10‑47 (MQ=255) cagccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTgg > 1:1887754‑M1/9‑51 (MQ=255) aGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagcc > 1:6082303‑M2/1‑39 (MQ=255) gccagcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTgg > 1:1488531‑M1/7‑49 (MQ=255) tttCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagccagcca > 1:2350634‑M2/1‑36 (MQ=255) ttCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagccagccagccag > 1:4408399‑M2/1‑35 (MQ=255) tCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagccagccagccagc < 1:1571044‑M2/51‑18 (MQ=255) agcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAtttt < 1:3096368‑M1/48‑1 (MQ=255) agcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAtttt > 1:2609112‑M1/4‑51 (MQ=255) agcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAtttt < 1:2304464‑M1/48‑1 (MQ=255) agcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGAtt > 1:6834078‑M1/4‑49 (MQ=255) gcCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTg > 1:1202591‑M1/3‑51 (MQ=255) acaGCCAGCCAGCCAGCCAGCCAGCCAGCCAGccagccagccagccagcca < 1:4344694‑M2/51‑20 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:1210059‑M2/51‑21 (MQ=255) cagccagccagccagccagccagccagccagccagccagccagccagccag < 1:4732352‑M2/51‑21 (MQ=255) | TTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTA > REL606/2103839‑2103938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |