| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3894996 | NA (NA) | 113 (1.420) | 57/100 | 0.1 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 4049580 = | 0 (0.000) | coding (324/1242 nt) | yihS | predicted glucosamine isomerase | |||||
Only 100 of 113 total aligned reads displayed.
AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894948‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC > REL606/4049580‑4049629 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT < 1:1052653/51‑1AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT < 1:301443/51‑1AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT > 1:5518236/1‑51AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT < 1:2654823/51‑1AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT < 1:6859662/51‑1AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT < 1:5676924/51‑1AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT < 1:5679708/51‑1AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT > 1:3832729/1‑51AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT > 1:1964020/1‑51AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT < 1:1926597/51‑1AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATT > 1:6696996/1‑51 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT > 1:6804608/1‑51 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT > 1:1679166/1‑51 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT > 1:4290947/1‑51 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:7186443/51‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:2351153/51‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:6960942/51‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:140833/51‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:6816201/51‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTG > 1:6495200/1‑51 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGG < 1:5111707/51‑1 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGG < 1:6595506/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA < 1:4443521/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA < 1:5709405/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA < 1:2188635/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA > 1:5310376/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAG < 1:3872172/51‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAG < 1:4426930/51‑1 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGG < 1:1617655/51‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGC > 1:231131/1‑51 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGC < 1:2327003/51‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGC > 1:4609051/1‑51 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCA > 1:433619/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCA > 1:3105264/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCA > 1:5192475/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCA < 1:606690/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCAC > 1:7089123/1‑51 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACC > 1:4378445/1‑51 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACC > 1:412258/1‑51 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCA > 1:5178473/1‑51 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCAC < 1:5568537/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCAC < 1:3805186/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACG > 1:6582732/1‑51 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACG < 1:3348425/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACG < 1:5926790/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGC > 1:5458094/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGC < 1:4205823/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGC > 1:3012449/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCC > 1:7129972/1‑51 TAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCC > 1:3523906/1‑51 CTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCG > 1:3647742/1‑51 TGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGT > 1:1388317/1‑51 TCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCA < 1:1733718/51‑1 TCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCA < 1:4061361/51‑1 CCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCAT > 1:5406299/1‑51 CAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATT > 1:3974838/1‑51 CAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATT < 1:1844236/51‑1 ACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCA > 1:4010440/1‑51 ACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCA < 1:1170126/51‑1 CTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCAC > 1:2137194/1‑51 CTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCAC < 1:3561792/51‑1 TTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACG < 1:7084798/51‑1 TTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACG > 1:1062406/1‑51 TTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACG > 1:6892001/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:6981364/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:6166211/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:7214788/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:4186067/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:6984316/1‑51 TTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCA > 1:5006826/1‑51 TTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCA > 1:6345027/1‑51 TTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAG > 1:2389910/1‑51 TTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAG < 1:6200528/51‑1 TTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAG < 1:6578364/51‑1 TTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAG > 1:3531366/1‑51 TGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGG > 1:6543861/1‑51 TGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGG > 1:2551634/1‑51 GGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGC < 1:7213490/51‑1 GGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCA < 1:4963069/51‑1 GGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCAT < 1:5137123/51‑1 GGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCAT > 1:247745/1‑51 TCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATAC < 1:3758396/51‑1 TCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATAC < 1:6929274/51‑1 TCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATAC < 1:6732219/51‑1 CAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACC < 1:328657/51‑1 AGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCA > 1:3510193/1‑51 AGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCA < 1:1415752/51‑1 AGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCA < 1:1363297/51‑1 AGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCA < 1:388415/51‑1 GTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAG > 1:4967034/1‑51 GTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAG < 1:7067591/51‑1 TACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGC > 1:1978405/1‑51 TACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGC < 1:6086031/51‑1 ACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCC < 1:6030640/51‑1 ACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCC < 1:2919360/51‑1 CATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCG > 1:2931343/1‑51 CATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCC > 1:6620335/1‑50 ATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC < 1:4183642/51‑1 ATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC > 1:2589913/1‑51 ATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC < 1:5865296/51‑1 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894948‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC > REL606/4049580‑4049629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |