| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC | REL606 | 1,609,175 | Δ7,554 bp | 100% | between IS3 | ybcW–[ECB_01526] | ybcW, gnsB, ynfN, ECB_01516, cspI, ydfP, ydfQ, ydfR, essQ, ECB_01522, ECB_01523, insE‑4, insF‑4, [ECB_01526] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1608037–1609162 | 1616598–1615471 | 6310–8562 | 4 [2] | [2] 3 | [insE‑3]–[insF‑4] | [insE‑3],insF‑3,ybcW,gnsB,ynfN,ECB_01516,cspI,ydfP,ydfQ,ydfR,essQ,ECB_01522,ECB_01523,insE‑4,[insF‑4] |
GAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCC > REL606/1616582‑1616735 | gAACTAATGCGGGCAACGGTGTTTAATTATAGCGATTGTGGTTACTATGGGTGGCGGCGGCAGAGATGGTGTGGAGGTGTCAGTAGGGAACAATGTGAAAACGAGGACCTCGCTTAGGGCTTTGTCCATATTACGTTGGTTGGACCatat > 1:644823/1‑150 (MQ=2) ataatTCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTAAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGc < 1:302602/150‑1 (MQ=21) tgtataagagacaggTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGcc < 2:23856/137‑1 (MQ=255) | GAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATATAGCC > REL606/1616582‑1616735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |