Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC	REL606	1,609,175	Δ7,554 bp	100%	between IS3	ybcW–[ECB_01526]	ybcW, gnsB, ynfN, ECB_01516, cspI, ydfP, ydfQ, ydfR, essQ, ECB_01522, ECB_01523, insE‑4, insF‑4, [ECB_01526]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	REL606	1608037–1609162	1616598–1615471	6310–8562	4 [2]	[2] 3	[insE‑3]–[insF‑4]	[insE‑3],insF‑3,ybcW,gnsB,ynfN,ECB_01516,cspI,ydfP,ydfQ,ydfR,essQ,ECB_01522,ECB_01523,insE‑4,[insF‑4]

CAAGATGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAG  >  REL606/1607887‑1608056                                                                                                                                                      |                     cAAGATGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAAt                      <  2:353314/150‑1 (MQ=255) cAAGATGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAAt                      <  2:575192/150‑1 (MQ=255)           tggggCGGGTATCTGACAATTGATCTTACCCAGCAATAGTAGACACGCGGATAAGTGATTAAACTCTCAGTCAGAGTTAACTCACATGACAAAAACAGTATCAACCAGTAAAAATCCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGa            <  1:34251/147‑1 (MQ=11)                     aTCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAg  <  1:58635/150‑1 (MQ=35)                                                                                                                                                      |                     CAAGATGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAG  >  REL606/1607887‑1608056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑