Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 2999597 3048488 48892 43 [0] [0] 27 [flu]–yghK [flu],yeeR,ECB_02802,yafZ,ECB_02804,yeeS,yeeT,yeeU,yeeV,yeeW,ECB_02810,ECB_02811,ECB_02812,ECB_02813,ECB_02814,ECB_02815,ECB_02816,ECB_02817,ECB_02818,ECB_02819,ECB_02820,ECB_02821,ECB_02822,insB‑22,insA‑22,ECB_02825,ECB_02826,ECB_02827,ECB_02828,yghD,yghE,ECB_02831,ECB_02832,ECB_02833,ECB_02834,ECB_02835,ECB_02836,ECB_02837,ECB_02838,yghF,yghG,pppA,yghJ,yghK

AAGCATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGGTATGGAATCACATTACGGGCACCCTGGTGGTGGCTTCCGAACTGGCCCGCTCACGGGGAAAACGCGCCGGTGTGGCGGTTGCGCTGTCTCTTGCTGCTGTTACGTCAGTCCCGGCACTGGCTGCTGACACGGTCGTACAGGCGGG  >  REL606/2999452‑2999742
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aaGCATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtac                                                                                                                                               >  2:77446‑M2/1‑145 (MQ=255)
aaGCATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtac                                                                                                                                               >  2:186029‑M2/1‑145 (MQ=255)
aaGCATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtac                                                                                                                                               >  1:237439‑M2/1‑145 (MQ=255)
aaGCATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtac                                                                                                                                               >  2:130634‑M2/1‑145 (MQ=255)
  gaattTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactg                                                                                                                                             >  1:439556‑M2/3‑143 (MQ=255)
  gCATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactg                                                                                                                                             <  2:104835‑M2/150‑8 (MQ=255)
  gCATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtaatg                                                                                                                                             <  1:50456‑M2/150‑8 (MQ=255)
   cATTTATGTCCGTGTAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactga                                                                                                                                            >  1:341590‑M2/1‑142 (MQ=255)
   cATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactga                                                                                                                                            <  2:342569‑M2/150‑9 (MQ=255)
                      ccACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCCGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagt                                                                                                                         <  1:57672‑M2/150‑28 (MQ=255)
                           ttATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaac                                                                                                                    <  2:118895‑M2/150‑33 (MQ=255)
                                     aTGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcata                                                                                                          <  1:604760‑M2/150‑43 (MQ=255)
                                         tGTTTTGTACCTGCCGGTATCCACATGTGTGGGTACCGGCTTTTTTATTCACCCTCTCTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaatttggacagttaaccactatgcatatagg                                                                                                      >  1:104531‑M2/1‑104 (MQ=255)
                                          gTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatatagtt                                                                                                     <  1:366605‑M2/150‑48 (MQ=255)
                                          gTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt                                                                                                     <  2:249511‑M2/150‑48 (MQ=255)
                                          gTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt                                                                                                     <  1:588477‑M2/150‑48 (MQ=255)
                                           ttttGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc                                                                                                    >  2:606534‑M2/1‑102 (MQ=255)
                                           tttgGTACCTGCCGGTATCCACATTTCTGGGTACCGGCATTTTTATTCACCCTCTGTAACGAATCGCTGATCAAACGCTCTCTGAACACCAGCTACAGGCTGtgtactgaccccaaatagttggacagttaaacacgaggcatataggtc                                                                                                    >  1:80292‑M2/1‑102 (MQ=255)
                                                        ggTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt                                                                                       <  2:244609‑M2/150‑62 (MQ=255)
                                                                                            cccTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattc                                                   <  2:217663‑M2/150‑98 (MQ=255)
                                                                                                ctGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttct                                               <  2:47288‑M2/150‑102 (MQ=255)
                                                                                                ctGTAAGGAAAAGCTGATGAAACGACATCTGAAAACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaaaacgaggcatataggcctgtttccgatattcaattggaggcagaccttttaatttcaggctaattcttct                                               <  2:396614‑M2/150‑102 (MQ=255)
                                                                                                    aaGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctg                                           <  1:577652‑M2/150‑106 (MQ=255)
                                                                                                         aaaGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgta                                      >  2:50609‑M2/1‑40 (MQ=255)
                                                                                                          aaGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtag                                     >  1:248801‑M2/1‑39 (MQ=255)
                                                                                                            gCTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagta                                   >  2:590213‑M2/1‑37 (MQ=255)
                                                                                                             cTGATGAAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtat                                  >  1:51459‑M2/1‑36 (MQ=255)
                                                                                                               gatgaAACGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattc                                >  2:666100‑M2/1‑34 (MQ=255)
                                                                                                                    aaTGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttacacacgtggcttataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagttttcaatat                           >  1:18014‑M2/1‑29 (MQ=255)
                                                                                                                    aaCGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat                           >  2:119201‑M2/1‑29 (MQ=255)
                                                                                                                    aaCGACATCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat                           >  1:47144‑M2/1‑29 (MQ=255)
                                                                                                                         agtctGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattcc                      >  2:598568‑M2/3‑24 (MQ=255)
                                                                                                                          aTCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccg                     >  2:57841‑M2/1‑23 (MQ=255)
                                                                                                                           tCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgt                    >  1:118548‑M2/1‑22 (MQ=255)
                                                                                                                           tCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccct                    <  1:596810‑M2/150‑129 (MQ=255)
                                                                                                                           tCTGAACACCAGCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtcagattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgt                    <  2:392846‑M2/150‑129 (MQ=255)
                                                                                                                              gtgtataagagacaggttgtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaac                 >  2:432023‑M2/12‑19 (MQ=255)
                                                                                                                                      gCTACAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatcct         <  2:484668‑M2/150‑140 (MQ=255)
                                                                                                                                          cAGGCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcag     >  2:367668‑M2/1‑7 (MQ=255)
                                                                                                                                             gCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttc  <  1:394081‑M2/150‑147 (MQ=255)
                                                                                                                                             gCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttc  >  2:308659‑M2/1‑4 (MQ=255)
                                                                                                                                             gCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttc  <  1:291578‑M2/150‑147 (MQ=255)
                                                                                                                                             gCTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttc  <  2:74914‑M2/150‑147 (MQ=255)
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AAGCATTTATGTCCGGGAAAAACCACTTTATCTGACCATGCTGTTTTGTACCTGCCGGTATCCACATTTGTGGGTACCGGCTTTTTTATTCACCCTCTGTAAGGAAAAGCTGATGAAACGACATCTGAACACCAGCTACAGGCTGGTATGGAATCACATTACGGGCACCCTGGTGGTGGCTTCCGAACTGGCCCGCTCACGGGGAAAACGCGCCGGTGTGGCGGTTGCGCTGTCTCTTGCTGCTGTTACGTCAGTCCCGGCACTGGCTGCTGACACGGTCGTACAGGCGGG  >  REL606/2999452‑2999742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: