| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,537,178 | +GTACTGACCCCAAAA :: IS150 (–) :: +CAA | 100% | coding (40/2199 nt) | zntA → | zinc, cobalt and lead efflux system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666133 | NA (NA) | 32 (1.310) +TGGGGTCAGTAC |
25/254 | NT | 97.2% | pseudogene (355/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 |
| ? | REL606 | = 3537178 | 1 (0.040) | coding (40/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
| * | ? | REL606 | 3537179 = | 1 (0.040) | 25 (0.960) +TTG |
15/272 | NT | 96.2% | coding (41/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
GGTCACTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGCGCCGCCTGTGC > REL606/3537030‑3537326 | ggTCACTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATg < 1:94099‑M2/150‑2 (MQ=255) cACTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtac > 2:298152‑M2/1‑146 (MQ=255) cACTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtac > 2:514494‑M2/1‑146 (MQ=255) agcttCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtac > 1:105486‑M2/3‑146 (MQ=255) cTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactg < 1:406663‑M2/150‑7 (MQ=255) cTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactg < 2:391848‑M2/150‑7 (MQ=255) cTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactg < 2:545676‑M2/150‑7 (MQ=255) cTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactg < 1:414899‑M2/150‑7 (MQ=255) cTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactg < 1:136114‑M2/150‑7 (MQ=255) cTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtacct < 2:105792‑M2/150‑7 (MQ=255) cTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGACCCTCAATgtactg < 1:76779‑M2/150‑7 (MQ=255) cTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGAAGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCATCAATgtactg < 1:654460‑M2/150‑7 (MQ=255) ccTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgacc > 2:416087‑M2/1‑141 (MQ=255) gctcgctGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtac > 2:100580‑M2/1‑130 (MQ=255) ctGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgacc < 2:622151‑M2/150‑26 (MQ=255) ctGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaag > 2:136506‑M2/1‑117 (MQ=255) ctGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaag < 2:590516‑M2/150‑34 (MQ=255) ggAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacccga < 1:372165‑M2/150‑52 (MQ=255) gTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggc > 2:656390‑M2/1‑96 (MQ=255) aCTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatat < 2:579554‑M2/150‑59 (MQ=255) aCTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatat < 2:553127‑M2/150‑59 (MQ=255) aCTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:309769‑M2/150‑59 (MQ=255) ccAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatatagg > 2:310645‑M2/1‑89 (MQ=255) agagTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 2:59179‑M2/1‑87 (MQ=255) agagTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 2:397116‑M2/1‑87 (MQ=255) agagTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:544098‑M2/1‑87 (MQ=255) acaaggtacacttacgttaatgaaaaaaaacTTAACCGGAGGATGCCATGTCAACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:588780‑M2/16‑87 (MQ=255) gagTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtat < 1:158513‑M2/150‑65 (MQ=255) gtATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgatt < 2:415594‑M2/150‑69 (MQ=255) agaAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggag > 2:94377‑M2/1‑65 (MQ=255) aaCTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagac > 2:158959‑M2/1‑59 (MQ=255) cTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtaagacct < 1:571462‑M2/150‑94 (MQ=255) aCCGGAGGATGCCATGTCGACTCCTGACAATCAAGGCAAGCAAGCCCCTCAATttactgaccccaaaatggcctgaccccataaagttggacagttaaacacgaggcttataggtctgattccgatattcaattggagtcagacctttta > 1:395135‑M2/1‑53 (MQ=255) gaTGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTcc > 2:115989/1‑150 (MQ=255) aTGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcagg < 2:408462‑M2/150‑106 (MQ=255) acaggacaaTCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgc > 1:452438‑M2/5‑32 (MQ=255) gACAATCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgcctgt < 2:453721‑M2/150‑123 (MQ=255) aTCACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtag > 2:407832‑M2/1‑24 (MQ=255) cACGGCAAGAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagta > 2:40921‑M2/1‑22 (MQ=255) gCAAGAAAGCCCCTGAATgtactgaaaccaaaatgtactaaccccaaaaagttggacagttaaacacgaggcatataggcctgattctaatactaacttggagtcagacattttaatttcaggctaattattctgctgttctagtattca < 1:185469‑M2/150‑133 (MQ=255) tataagagtcagatgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat > 1:404528‑M2/13‑14 (MQ=255) gAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat > 1:414406‑M2/1‑14 (MQ=255) gAAAGCCCCTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat > 2:77005‑M2/1‑14 (MQ=255) agagacagctcaatgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatat > 2:440483‑M2/9‑14 (MQ=255) cccTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccg < 2:62192‑M2/150‑143 (MQ=255) ccTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgt < 2:276453‑M2/150‑144 (MQ=255) cTCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatgtgtctct < 1:439236‑M2/150‑145 (MQ=255) tCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgcttttgtagtattcaatatattccgtaa < 1:234160‑M2/150‑146 (MQ=255) tCAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaa < 1:176377‑M2/150‑146 (MQ=255) gacctgtactgaccccaaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgta < 1:18039‑M2/146‑146 (MQ=255) cAATgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaac < 2:551294‑M2/150‑147 (MQ=255) atgtactgaccccaaaatgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccaatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatctgtctcttata < 2:405692‑M2/150‑149 (MQ=255) | GGTCACTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGCGCCGCCTGTGC > REL606/3537030‑3537326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |