| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,537,178 | +GTACTGACCCCAAAA :: IS150 (–) :: +CAA | 100% | coding (40/2199 nt) | zntA → | zinc, cobalt and lead efflux system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666133 | NA (NA) | 32 (1.310) +TGGGGTCAGTAC |
25/254 | NT | 97.2% | pseudogene (355/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 |
| ? | REL606 | = 3537178 | 1 (0.040) | coding (40/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
| * | ? | REL606 | 3537179 = | 1 (0.040) | 25 (0.960) +TTG |
15/272 | NT | 96.2% | coding (41/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
GGTCACTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGCGCCGCCTGTG > REL606/3537030‑3537325 | accaaaacgttccgagaagttcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaat > 1:651146‑M1/150‑150 (MQ=255)accaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaatggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaat > 1:102356‑M1/150‑150 (MQ=255)accaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaat > 2:548036‑M1/150‑150 (MQ=255)accaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaat > 2:159490‑M1/150‑150 (MQ=255)accaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaat > 2:103275‑M1/150‑150 (MQ=255) aacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTtgctg > 1:109848‑M1/145‑150 (MQ=255) agatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAAc > 1:339517‑M1/136‑150 (MQ=255) ctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAAcc > 2:128868‑M1/128‑150 (MQ=255) ctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAAcc > 2:113846‑M1/128‑150 (MQ=255) tcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAAc > 2:39647‑M1/116‑150 (MQ=255) caggttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAAc > 1:133173‑M1/116‑150 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAACCCGCTAACCACGGTACAGAACGcc < 1:54009‑M1/38‑1 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAgaacctg < 2:133557‑M1/38‑4 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGcc < 2:566740‑M1/38‑1 (MQ=255) gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagcgtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTACAAACCACTAACCACGGTACAGAACGcc < 1:599961‑M1/38‑1 (MQ=255) tgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCaa > 2:154088‑M1/111‑150 (MQ=255) gtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTg < 2:455458‑M1/46‑1 (MQ=255) ttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCCAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGc > 2:423842‑M1/80‑150 (MQ=255) ggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGc < 1:344519‑M1/81‑1 (MQ=255) tgtataagagacaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGaaaa > 1:546855‑M1/60‑150 (MQ=255) ttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACg > 2:321185‑M1/58‑150 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCgg < 2:184563‑M1/100‑1 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCgg < 1:507839‑M1/100‑1 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCgg > 1:435364‑M1/51‑150 (MQ=255) gaTGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTcc > 2:115989/1‑150 (MQ=255) gggctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAAcgctctctgaaaactgtctcttataca < 2:548440‑M1/105‑14 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCt > 1:454167‑M1/43‑150 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGc < 2:483450‑M1/113‑1 (MQ=255) tgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGAc > 2:75240‑M1/17‑150 (MQ=255) tgggtgcagtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGAc > 2:207131‑M1/17‑150 (MQ=255) tgggtgaagtacacaaTTGCTGCGTTCAAACCGTTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGAc > 1:565092‑M1/17‑150 (MQ=255) gtacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGcgccgc < 2:57455‑M1/142‑1 (MQ=255) tacacaaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGCgccgcc > 2:653375‑M1/8‑150 (MQ=255) caaTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGCGCCGCCtgtg < 1:64127‑M1/147‑1 (MQ=255) | GGTCACTTCCTGATCGTCCGCTCGCTGTATCTCTGATAAAACTTGACTCTGGAGTCGACTCCAGAGTGTATCCTTCGGTTAATGAGAAAAAACTTAACCGGAGGATGCCATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCTCGCCAACGCTCTCTGAAAACGTCTCCGGCTCCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGCGCCGCCTGTG > REL606/3537030‑3537325 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |