| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,766,595 | IS150 (+) +3 bp | 100% | coding (1111‑1113/1206 nt) | gltS ← | glutamate transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3766595 = | 0 (0.000) | 32 (1.210) | 20/276 | NT | 100% | coding (1113/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
| * | ? | REL606 | = 3766597 | 0 (0.000) | 22 (0.820) | 15/278 | NT | 100% | coding (1111/1206 nt) | gltS | glutamate transporter |
| ? | REL606 | 3893554 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
TATGGCGACAGTGTTCACGTAGCGTTTCCGGTTCCTTCCGACGCTTTTTCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCGCATCGTAGTTTTTGCCCATCATGCGCCAGGTAACGAAGAT > REL606/3766448‑3766744 | tatGGCGACAGTGTTCACGTAGCGTTTCCGGTTCCTTCCGACGCTTTTTCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCaaaaa > 1:540059/1‑150 (MQ=255) gaactgaaggatgctgttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc > 2:212779‑M1/147‑150 (MQ=255) gaactgaaggatgctgttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAAc > 1:296836‑M1/147‑150 (MQ=255) aactgaaggatgctgttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAacc < 2:297682‑M1/5‑2 (MQ=255) gaaggatgctgttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCAt < 1:637266‑M1/9‑1 (MQ=255) gtgtTCACGTAGCGTTTCCGGTTCCTTCCGACGCTTTTTCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCTCATTGACGAAATAGATAAAGAACGCACCGACCATCGGCACTACCAAAAAtgtacttaac > 1:75638‑M1/1‑140 (MQ=255) gtgtTCACGTAGCGTTTCCGGTTCCTTCCGACGCTTTTTCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcac > 2:223456‑M1/1‑140 (MQ=255) gttacggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACggg < 2:180305‑M1/19‑1 (MQ=255) ggaatatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCaaa < 2:166079‑M1/24‑1 (MQ=255) gtataagagacagctacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:243907‑M1/125‑150 (MQ=255) cagatattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGc > 1:613254‑M1/125‑150 (MQ=255) atattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAaagcctg < 2:615053‑M1/29‑4 (MQ=255) atattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGtt < 2:58424‑M1/29‑1 (MQ=255) atattgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGtt < 1:598908‑M1/29‑1 (MQ=255) ttgaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAg > 2:526858‑M1/119‑150 (MQ=255) gaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatattcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTg < 2:379332‑M1/34‑1 (MQ=255) gaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTg < 2:195501‑M1/34‑1 (MQ=255) gaatactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTg < 2:378749‑M1/34‑1 (MQ=255) tactacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATc < 2:255617‑M1/37‑1 (MQ=255) cttccGACGCTTTTTCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatgg < 2:150944‑M1/150‑35 (MQ=255) cttccGACGCTTTTTCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatgg > 2:615195‑M1/1‑116 (MQ=255) ctgtcaacgctttTTCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACTGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatgg < 1:411745‑M1/144‑35 (MQ=255) ctacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGcgacgggccaaagcctgtctcttatac < 2:244601‑M1/39‑14 (MQ=255) ctacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGc < 2:392495‑M1/39‑1 (MQ=255) ctacaacagcagaagaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGc < 2:19234‑M1/39‑1 (MQ=255) ttCATTTTTAACCGGCTAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCCCCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 1:340509‑M1/150‑48 (MQ=255) tCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 2:541626‑M1/150‑49 (MQ=255) tCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:68140‑M1/150‑49 (MQ=255) gaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGa < 1:15268‑M1/53‑1 (MQ=255) ccGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc < 1:144388‑M1/150‑59 (MQ=255) cATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa < 1:512106‑M1/150‑76 (MQ=255) cATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa < 1:593826‑M1/150‑76 (MQ=255) ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCaaaa < 2:562234‑M1/82‑1 (MQ=255) ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCaaaa < 1:238412‑M1/82‑1 (MQ=255) gaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAg > 2:639140‑M1/63‑150 (MQ=255) cTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag > 2:170499‑M1/1‑63 (MQ=255) cggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGAccc > 2:15317‑M1/57‑150 (MQ=255) aGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatca < 2:540190‑M1/150‑98 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGcagccag < 1:441682‑M1/102‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGcagccag < 1:492569‑M1/102‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCa < 1:379146‑M1/104‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCa < 2:129092‑M1/104‑1 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCAc > 2:155830‑M1/46‑150 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCAc > 2:239087‑M1/46‑150 (MQ=255) atatCGATAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaac < 1:540364‑M1/150‑110 (MQ=255) agacagataaaGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaac < 1:372772‑M1/145‑110 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCGCAt > 2:325694‑M1/38‑150 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaAGACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGTTTGCCGTTGGTGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCGCATCg > 1:87673‑M1/36‑150 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCGCATCGt < 2:50277‑M1/116‑1 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCACATCGt < 2:611234‑M1/116‑1 (MQ=255) aTAAAGAACGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaacctgtct > 2:373853‑M1/1‑35 (MQ=255) aCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttac > 2:74652‑M1/1‑28 (MQ=255) aCGCACCGACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttac > 2:13618‑M1/1‑28 (MQ=255) gACCATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatca > 1:428925‑M1/1‑21 (MQ=255) aCCATCGGCACCACCAAAAAtgtactgcacccattttttttgaagatgaaatggaatatcccctaatgtgtcaaagcaaaaataccctgttgaaaagcgtcttgaagtcgtgaatcagtacttcatagctgatgccggttacaggatcat > 1:119959‑M1/1‑20 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatc < 1:74434‑M1/150‑132 (MQ=255) ccATCGGCACCACCAAAAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatc < 2:391577‑M1/150‑132 (MQ=255) cagtacaAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCGCATCGTAGTTTTTGCCCATCATGCGCCAGGTaa < 2:652295‑M1/143‑1 (MQ=255) caAAGCGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGTCGATTTCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCATCACTGCCGCATCGTAGTTTTTGCCCATCATGCGCCAGGTAACGAAg > 1:254887‑M1/3‑150 (MQ=255) caAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCGCATCGTAGTTTTTGCCCATCATGCGCCAGGTAACGAAg > 2:442932‑M1/3‑150 (MQ=255) aaaCGCCAGGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCGCATCGTAGTTTTTGCCCATCATGCGCCAGGTAACGAAGAt < 1:19173/150‑1 (MQ=255) | TATGGCGACAGTGTTCACGTAGCGTTTCCGGTTCCTTCCGACGCTTTTTCATTTTTAACCGGCAAAAATCGGCAACATTAAATACAGCTTAATCACCAGCGCATTGACGATATCGATAAAGAACGCACCGACCATCGGCACCACCAAAAACGCCATGTGCGACGGGCCAAAGCGTTCAGTGATCGCCTGCATGTTGGCGATTGCCGTTGGCGTTGCACCGAGGCCAAAACCACAGTGACCCGCAGCCAGCACTGCCGCATCGTAGTTTTTGCCCATCATGCGCCAGGTAACGAAGAT > REL606/3766448‑3766744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |