| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 2,322,340 | IS186 (+) +6 bp | 66.0% | coding (131‑136/963 nt) | menC ← | O‑succinylbenzoate synthase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2322340 = | 9 (0.360) | 7 (0.270) | 5/272 | NT | 42.6% | coding (136/963 nt) | menC | O‑succinylbenzoate synthase |
| ? | REL606 | = 2774196 | NA (NA) | noncoding (1343/1343 nt) | IS186 | repeat region | |||||
| * | ? | REL606 | = 2322345 | 9 (0.360) | 28 (1.070) | 19/272 | NT | 74.8% | coding (131/963 nt) | menC | O‑succinylbenzoate synthase |
| ? | REL606 | 2772854 = | NA (NA) | noncoding (1/1343 nt) | IS186 | repeat region | |||||
GTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGTTTGAATT > REL606/2322196‑2322494 | tctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaaggaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgtttatgggAGAtct < 2:593519‑M1/6‑1 (MQ=255) gCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccat > 2:132041‑M1/1‑145 (MQ=255) acaggtggctattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgtgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggAGATCTCCCCCCAccc > 1:591779‑M1/135‑150 (MQ=255) acaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggAGATCTCCCCCCAccc > 2:652303‑M1/135‑150 (MQ=255) acaggtggccattcgtgggacagtagccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggAGATCTCCCCCCAccc > 2:680919‑M1/135‑150 (MQ=255) gCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCGCACTTTGCGCCTCTTCCAAGGTTTCCTGACTGAAGCCCCGCAGTGAGGAGATCTtccataagcgctaact > 1:74811‑M1/1‑134 (MQ=255) gCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTcgcg > 2:299995/1‑150 (MQ=255) cGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagg > 2:73707‑M1/1‑129 (MQ=255) ccAAAGGCGACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGACGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggt < 1:463202‑M1/150‑24 (MQ=255) ccAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggt < 2:5503‑M1/150‑24 (MQ=255) ggCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtgg > 2:603254‑M1/1‑122 (MQ=255) ccACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggta < 2:239126‑M1/150‑31 (MQ=255) cGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtatta > 1:227572‑M1/1‑117 (MQ=255) aGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcc < 2:154745‑M1/150‑38 (MQ=255) aGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCAAGTTATTTACCCAGGCAAGCAGCACACCTGGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgccaacttaagggttgtggtattacgcc < 1:419764‑M1/150‑38 (MQ=255) gCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACAt < 2:448054/150‑1 (MQ=255) aTCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATAc < 1:119436/150‑1 (MQ=255) gCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaac < 1:502458‑M1/150‑52 (MQ=255) cTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacg < 2:437243‑M1/150‑53 (MQ=255) ccTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGACGCGGGTTTTTAAc < 1:126962/150‑1 (MQ=255) gTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTcgcg > 2:63354/1‑150 (MQ=255) tATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCa > 2:19509/1‑150 (MQ=255) ttACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataac < 2:283933‑M1/150‑79 (MQ=255) ttACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataac < 2:18481‑M1/150‑79 (MQ=255) ttACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataac < 2:143218‑M1/150‑79 (MQ=255) tcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAac > 2:514545‑M1/66‑150 (MQ=255) aGGCAAGCAGCACACTTTTCCCCTCTCCCCATGTTTCCTGACTGAAGCCTGGCCGGTGGGATATCTCCCCCCCCCCTTCGCCCTCGCCTTCACGCAGGCAAACATACACCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCAccc < 1:489782/150‑1 (MQ=255) ggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCcgc < 2:243916‑M1/94‑1 (MQ=255) gcagcaCACTTTGCGCCTCTTCCAAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTaccataagcgctcacttaagggttgtggtattacgcctgctatgatttaacgtgccgatgaattactctcacgataactggtcagcaatt > 1:138351‑M1/1‑60 (MQ=255) ttGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccata > 2:44107‑M1/1‑50 (MQ=255) ctctTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccatacgcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggta < 1:282404‑M1/150‑107 (MQ=255) ctctTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctcacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggta < 1:73491‑M1/150‑107 (MQ=255) ctctTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggta < 2:218419‑M1/150‑107 (MQ=255) tCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcc > 2:202431‑M1/1‑40 (MQ=255) gTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATAcc < 1:299146/150‑1 (MQ=255) ttCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTg < 2:159894/150‑1 (MQ=255) acccttaagttagcgcttatgggAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTgcgc < 2:364082‑M1/127‑1 (MQ=255) gactgaAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggat < 2:228220‑M1/150‑124 (MQ=255) gactgaAGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggat < 2:96219‑M1/150‑124 (MQ=255) aaGCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttc > 2:362637‑M1/1‑22 (MQ=255) gCCCGGCAGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcgg > 2:56586‑M1/1‑20 (MQ=255) aGTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgctttaacgtgccgatgaattactcgcactataactggtcagcaattctggcccatactggtaagcccgaagaactggatactgcggcacgtaa > 1:462827‑M1/1‑13 (MQ=255) gTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaat > 2:636998‑M1/1‑12 (MQ=255) gTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaat > 2:451002‑M1/1‑12 (MQ=255) gTGGGGAGATCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaat > 2:73962‑M1/1‑12 (MQ=255) ggAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGt < 2:126262‑M1/148‑1 (MQ=255) gaTCTcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccgggg > 2:559105‑M1/1‑5 (MQ=255) ctcCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCCAACATACAGCCCGTCGCTGGTCTTTAACCGTCTCTCGCGCAGCACCACCGCCCCGGCCCGTGGGTACTTCCACCGGTGTACCTTCGCTCCACCCATTACGGAtttctctttgat > 1:555834/1‑140 (MQ=255) tcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctct > 2:671965‑M1/1‑1 (MQ=255) | GTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGTTTGAATT > REL606/2322196‑2322494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |