New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	= 1974039	NA (NA)	14 (0.520)	13/278	NT	93.3%	noncoding (768/768 nt)	IS1	repeat region
	?	REL606	1982313 =	1 (0.040)					coding (664/798 nt)	yeeI	hypothetical protein

GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/1973918‑1974039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGATACAGACTCGTTTTCGGCGACGAATGTTCATTAATCAACAAC  >  REL606/1982313‑1982455                                                                                                                                                                                                                                                                           GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTT                                                                                                                     >  2:361457/1‑150       ACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTGGACCCTCGTTCCCTTT                                                                                                               >  1:278085/1‑150       ACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACAATATCAATAAGTTGGAGTCATTACCAGCGCCCAAGAACTTTTTGCTACTCGTTTCACTT                                                                                                               >  1:526813/1‑150                                                   GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCCATTTTATCAACAAGATCCTTTG                                                                   >  1:227878/1‑150                                                          TGCATGACAAAGTCGTCGGGCATTATCTGAACATAAAACACTATCAAGAAGTTGGAGTCATTGCCAGCGCCCCGGAACTTTTTGCTCCTCGTTTCCCTTCAGTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGAC                                                            <  1:360419/150‑1                                                                     GTCATCGGGCATTATCAGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCATCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGCTCATTTGCTGAGACTGCATCACGCT                                                 >  1:365398/1‑150                                                                          CGGGCATTATCTGAACATAAAACACTATCCATAATTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCACTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGA                                            <  2:394823/150‑1                                                                            GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGATA                                          >  1:143085/1‑150                                                                             GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGATAC                                         <  2:600699/150‑1                                                                                TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGATACAGA                                      <  2:23466/150‑1                                                                                  ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGATACAGACT                                    <  2:104610/150‑1                                                                                                CACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGATACAGACTCGTTTTCGGCGACG                      >  2:210692/1‑150                                                                                                                  GTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGATACAGACTCGTTTTCGTCGACGAATGTTCATTAATCAAta    >  1:481297/1‑148                                                                                                                   TCATTA‑CAGCGCCCCTGAACTTGTTGGTCCTCGTTTCCATTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTGGCTGAGACTGCATCTCGCTAATGTTACAGACTCGTTTTCGGCGACGAATGTTCATTAATCAACAAC  <  1:82031/150‑1                                                                                                                                                                                                                                                                           GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/1973918‑1974039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGATACAGACTCGTTTTCGGCGACGAATGTTCATTAATCAACAAC  >  REL606/1982313‑1982455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.