| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | ADP1‑WT | 1,248,192 | Δ1,237 bp | ACIAD1249–[csrA] | ACIAD1249, ACIAD1250, [csrA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | ADP1‑WT | 1248192 | 1249428 | 1237 | 36 [0] | [0] 37 | ACIAD1249–[csrA] | ACIAD1249,ACIAD1250,[csrA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ADP1‑WT | = 1248191 | 0 (0.000) | 36 (1.040) | 32/250 | 0.2 | 100% | intergenic (+164/+6) | rnhB/ACIAD1249 | ribonuclease HII/IS1236 transposase protein 2 |
| ? | ADP1‑WT | 1249429 = | 0 (0.000) | coding (175/213 nt) | csrA | carbon storage regulator | |||||
ATTAGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ADP1‑WT/1248069‑1248191‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCTTTAACACCAAGCACAGTA > ADP1‑WT/1249429‑1249544 ATTAGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCAT > 2:458991/1‑126 AGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCA < 1:28000/126‑1 AGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCA < 1:44462/126‑1 AGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCA < 2:250738/126‑1 GCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGC < 2:240074/126‑1 CTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCA < 1:385077/126‑1 GGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGT < 1:231326/126‑1 GAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTAATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTG > 2:194717/1‑126 AATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACG < 2:244429/126‑1 TAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTG < 2:305876/126‑1 CTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTAATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCT < 1:195011/126‑1 AACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCAC > 1:265959/1‑126 ACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACG > 1:152616/1‑126 TTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGA < 1:459653/126‑1 TAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAA < 2:311478/126‑1 AAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAAC < 2:260387/126‑1 AAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACA > 1:152626/1‑126 ATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGA < 2:464884/126‑1 ATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGA < 2:183021/126‑1 ATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGAC < 1:33818/126‑1 TTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACT > 1:29684/1‑126 TTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTT > 2:370217/1‑126 TTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTT > 2:68604/1‑126 TGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCT < 2:265559/126‑1 GAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTC < 2:457895/126‑1 AGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCG < 2:76822/126‑1 GTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGG < 1:84163/126‑1 TAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGACAAATCTCTTCACGATGAACAGAGACTTCTTTCGGA > 2:98973/1‑126 TATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCAT > 1:252747/1‑126 AAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATA < 1:219937/126‑1 GAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGA < 1:441539/126‑1 GCTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATGCGAACCT > 1:160842/1‑126 CTGATAATCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTG < 2:29644/126‑1 TCTTGATCTAAATGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCT > 1:245931/1‑126 TGTTGAAGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCTTTAACACCAAGC > 2:278608/1‑126 AGATGTTCATCATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCTTTAACACCAAGCACAGTA < 2:346991/126‑1 ATTAGCCGCTTTAATTTGGGAGAAAAATTAAAAAATAACTTTAACGGTTAAAATTATTTTGTGAGTAGTTATCATCTTCAAAAGAAGGCTGATAATCTTGATCTAAATGTTGAAGATGTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ADP1‑WT/1248069‑1248191‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGCATTGCACGTTCGTGTTGAATACGTTGATAAATCTCTTCACGATGAACAGAGACTTCTTTCGGAGCATTCACACCAATACGAACCTGATTACCTTTAACACCAAGCACAGTA > ADP1‑WT/1249429‑1249544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |