Breseq Developer Notes

In addition to the normal prerequisites for breseq, you will also need updated versions of these tools to work on breseq development. (On MacOSX, these can be installed using MacPorts.)

  • Mercurial
  • automake
  • autoconf
  • libtool
  • Sphinx (optional, only required for building documentation)

To get started, first clone the breseq repository.

Then run the bootstrap script. This generates the usual configure script.


This topic: Lab > WebHome > SoftwareList > ToolsBacterialGenomeResequencing > BreseqDevelopment
Topic revision: r1 - 2011-01-25 - JeffreyBarrick