New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? REL606 1200603 =51 (1.050)8 (0.160) 4/62 5.5 coding (362/1137 nt) potA putrescine/spermidine ABC transporter ATPase protein
?REL606 2598461 = 31 (0.570)coding (600/1512 nt) yphE fused predicted sugar transporter subunits of ABC superfamily: ATP‑binding components
Rejected: Position hash score below cutoff.

AAATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCCGC..................................  <  REL606/1200641‑1200603
...................................CCGCCACGCCCAGTGCCGACATCTTTTTCACCGCGCTG  >  REL606/2598461‑2598494
                                                                         
AAATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCC                                       >  1:1317134/1‑36 (MQ=255)
 AATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCC                                      <  1:7248816/36‑1 (MQ=255)
 AATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCC                                      <  1:5426395/36‑1 (MQ=255)
 AATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCC                                      >  1:2896557/1‑36 (MQ=255)
  ATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCCG                                     <  1:5124173/36‑1 (MQ=255)
  ATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCCG                                     >  1:3159246/1‑36 (MQ=255)
                       tgaAAAAAACCCCCGCCACGCCCAGTGCCGACATCT                <  1:3563909/33‑1 (MQ=255)
                          AAAAAACCCCCGCCACGCCCAGTGCCGACATCTTTT             <  1:3419005/36‑1 (MQ=255)
                          AAAAAACCCCCGCCACGCCCAGTGCCGACATCTTTT             <  1:5374459/36‑1 (MQ=255)
                           AAAACCCCCCGCCACGCCCAGTGCCGACATCTTTTT            <  1:422161/36‑1 (MQ=255)
                            AAACCCCCCGCCACGCCCAGTGCCGACATCTTTTTC           <  1:6345741/36‑1 (MQ=255)
                                 CCCCGGCACGCCCAGTGCCGACATCTTTTTCACCGC      <  1:6513876/36‑1 (MQ=255)
                                 CCCCGCCACGCCCAGTGCCGACATCTTTTTCACCGC      <  1:1999333/36‑1 (MQ=255)
                                 CCCCCCCACGCCCAGTGCCGACATCTTTTTCACCGC      <  1:664195/36‑1 (MQ=255)
                                   CCGCCACGCCCAGTGCCGACATCTTTTTCACCGCGC    <  1:1511149/36‑1 (MQ=255)
                                    CGCCACGCCCAGTGCCGACATCTTTTTCACCGCGCT   <  1:6344382/36‑1 (MQ=255)
                                     GCCACGCCCAGTGCCGACATCTTTTTCACCGCGCTa  >  1:1100833/1‑35 (MQ=255)
                                     GCCACGCCCAGTGCCGACATCTTTGTCACCGCGCTG  <  1:5942504/36‑1 (MQ=255)
                                                                         
AAATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCCGC..................................  <  REL606/1200641‑1200603
...................................CCGCCACGCCCAGTGCCGACATCTTTTTCACCGCGCTG  >  REL606/2598461‑2598494

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 18 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG