New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 226 1 =0 (0.000)61 (0.920) 55/200 0.0 100% intergenic (–/–) –/– –/–
?5 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTCACACAACGAGTCGC  >  226/1‑99
                                                                                                   |                                                                                                  
cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaggttagcgcttatgggtt                                                                                                   <  2:1456174‑M1/2‑1 (MQ=255)
cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggtt                                                                                                   <  1:1448036‑M1/2‑1 (MQ=255)
 ctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggttt                                                                                                  <  2:987517‑M1/3‑1 (MQ=255)
  tacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggtttt                                                                                                 >  1:1039734‑M1/98‑101 (MQ=255)
  tacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggtttt                                                                                                 <  1:1455005‑M1/4‑1 (MQ=255)
   acaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTa                                                                                                >  2:107942‑M1/97‑101 (MQ=255)
    caaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTAc                                                                                               <  2:1272718‑M1/6‑1 (MQ=255)
      aaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTAccc                                                                                             >  1:28012‑M1/94‑101 (MQ=255)
       aacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTAcccc                                                                                            >  2:1454999‑M1/93‑101 (MQ=255)
        acgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTAccccc                                                                                           >  1:1019805‑M1/92‑101 (MQ=255)
          gcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCcgc                                                                                         <  1:8289‑M1/12‑1 (MQ=255)
            aattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCgt                                                                                       <  2:655769‑M1/14‑1 (MQ=255)
               tgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCgtggt                                                                                    >  1:425097‑M1/85‑101 (MQ=255)
                 aagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGtggtgg                                                                                  >  1:575148‑M1/83‑101 (MQ=255)
                 aagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGtggtgg                                                                                  <  2:482207‑M1/19‑1 (MQ=255)
                         gaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTActtct                                                                          <  2:111373‑M1/27‑1 (MQ=255)
                         gaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTActtct                                                                          >  1:671382‑M1/75‑101 (MQ=255)
                              atcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGAt                                                                     >  1:332616‑M1/70‑101 (MQ=255)
                                  tcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGt                                                                 <  1:565464‑M1/36‑1 (MQ=255)
                                   cttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTa                                                                <  1:671064‑M1/37‑1 (MQ=255)
                                     taacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAg                                                              >  2:49286‑M1/63‑101 (MQ=255)
                                       acgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCg                                                            <  1:496946‑M1/41‑1 (MQ=255)
                                          aggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCgaga                                                         >  2:245565‑M1/58‑101 (MQ=255)
                                          aggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCgaga                                                         >  2:671059‑M1/58‑101 (MQ=255)
                                           ggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGaa                                                        >  1:1372888‑M1/57‑101 (MQ=255)
                                            gcaccgaggagtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAAc                                                       >  2:1705379‑M1/56‑101 (MQ=255)
                                              accgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTg                                                     <  2:615564‑M1/48‑1 (MQ=255)
                                                  aggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCtt                                                 >  2:548354‑M1/50‑101 (MQ=255)
                                                     cgtcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTaaa                                              >  1:212156‑M1/47‑101 (MQ=255)
                                                       tcgcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACt                                            >  2:1006899‑M1/45‑101 (MQ=255)
                                                         gcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTTCTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTcc                                          <  2:1145537‑M1/59‑1 (MQ=255)
                                                         gcattcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTcc                                          >  2:1484402‑M1/43‑101 (MQ=255)
                                                           attcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCAt                                        <  1:368796‑M1/61‑1 (MQ=255)
                                                           attcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCAt                                        <  1:1071032‑M1/61‑1 (MQ=255)
                                                           attcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCAt                                        <  2:1435587‑M1/61‑1 (MQ=255)
                                                             tcttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATAc                                      <  1:382233‑M1/63‑1 (MQ=255)
                                                              cttcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATAcc                                     <  1:1695014‑M1/64‑1 (MQ=255)
                                                                tcagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCAc                                   >  2:1606360‑M1/36‑101 (MQ=255)
                                                                 cagatggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACg                                  <  1:950280‑M1/67‑1 (MQ=255)
                                                                  agatggttcaacccttaggttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGt                                 <  1:139095‑M1/68‑1 (MQ=255)
                                                                     tggttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTtct                              >  2:1656183‑M1/31‑101 (MQ=255)
                                                                       gttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAGCTCCATACCACGTTctct                            >  2:1030664‑M1/29‑101 (MQ=255)
                                                                       gttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTctct                            >  1:655774‑M1/29‑101 (MQ=255)
                                                                        ttcaacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTg                           <  2:1468880‑M1/74‑1 (MQ=255)
                                                                          caacccttaagttagcgcttatgggTTTTCCCCCCGCGTGCTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGAt                         >  2:1639201‑M1/26‑101 (MQ=255)
                                                                           aacccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACCTCTTCGCTTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATa                        >  2:571655‑M1/25‑101 (MQ=255)
                                                                            acccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATac                       <  1:471727‑M1/78‑1 (MQ=255)
                                                                            acccttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACCCCACACCACGTTCTCTGATac                       >  2:52999‑M1/24‑101 (MQ=255)
                                                                               cttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATactca                    <  1:612468‑M1/81‑1 (MQ=255)
                                                                                ttaagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATactcaa                   <  1:1066989‑M1/82‑1 (MQ=255)
                                                                                 taagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATactcaac                  <  2:1230169‑M1/83‑1 (MQ=255)
                                                                                  aagttagcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATactcaact                 <  1:280326‑M1/84‑1 (MQ=255)
                                                                                       agcgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTcacac            <  1:761169‑M1/89‑1 (MQ=255)
                                                                                         cgcttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAActcacacta          <  1:953483‑M1/91‑3 (MQ=255)
                                                                                           cttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTCACACAACg        <  2:665001‑M1/93‑1 (MQ=255)
                                                                                            ttatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTCACACAACGa       >  1:997355‑M1/8‑101 (MQ=255)
                                                                                             tatgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTCACACAACGAg      >  2:368796‑M1/7‑101 (MQ=255)
                                                                                             tatgggTTTTACCCCCGCGTGGGGGCTACTTCTTCGGTTCGTAAGCGAGAACTGCCTTAGACTCCATACCACGTTCTCTGATACTCAACTCACACAACGAg      <  2:159477‑M1/95‑1 (MQ=255)
                                                                                               tgggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTCACACAACGAGTc    >  1:1668544‑M1/5‑101 (MQ=255)
                                                                                                 ggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGGGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTCACACAACGAGTCGc  <  2:92841‑M1/99‑1 (MQ=255)
                                                                                                 ggTTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTCACACAACGAGTCGc  <  2:863269‑M1/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTACCCCCGCGTGGTGGCTACTTCTTCGATTCGTAAGCGAGAACTGCCTTAAACTCCATACCACGTTCTCTGATACTCAACTCACACAACGAGTCGC  >  226/1‑99

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.