| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 148 | = 9904 | 0 (0.000) | 77 (1.160) | 63/200 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 220 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AAGGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 148/9805‑9904 | aaGGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCc < 1:1685120‑M1/101‑2 (MQ=255) gtggtCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggt < 2:196007‑M1/101‑5 (MQ=255) gtggtCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggt > 1:787221‑M1/1‑97 (MQ=255) tggtCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggtt < 2:1534897‑M1/101‑6 (MQ=255) ggtCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggtta < 2:401412‑M1/101‑7 (MQ=255) ggtCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggtta < 1:24749‑M1/101‑7 (MQ=255) gtCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttat > 2:1404331‑M1/1‑94 (MQ=255) gtCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttat < 2:1664555‑M1/101‑8 (MQ=255) gtCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttat > 2:1056018‑M1/1‑94 (MQ=255) acacCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcag < 2:105756‑M1/101‑12 (MQ=255) ccTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttc < 2:1676393‑M1/101‑15 (MQ=255) tGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgc > 2:1667380‑M1/1‑85 (MQ=255) cgttaacgttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgcttta < 2:332763‑M1/101‑21 (MQ=255) cgttaacgttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgcttta > 2:847163‑M1/1‑81 (MQ=255) cgttaacgttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgcttta < 1:21275‑M1/101‑21 (MQ=255) cgttaacgttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgcttta < 2:382839‑M1/101‑21 (MQ=255) ttaacgttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaac > 1:513541‑M1/1‑79 (MQ=255) ttaaagttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaac > 1:1346154‑M1/1‑79 (MQ=255) acgttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactct < 2:929470‑M1/101‑26 (MQ=255) cgttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctc < 1:501104‑M1/101‑27 (MQ=255) ttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctg < 2:877594‑M1/101‑29 (MQ=255) ttCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctg > 2:108384‑M1/1‑73 (MQ=255) gtcgtGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccg < 1:676702‑M1/101‑35 (MQ=255) cgtGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccgga < 1:262353‑M1/101‑37 (MQ=255) tGAAACTCAGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaac > 1:1101486‑M1/1‑63 (MQ=255) gAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaaca > 2:182107‑M1/1‑62 (MQ=255) gAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaaca > 2:130183‑M1/1‑62 (MQ=255) gAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaaca > 2:357868‑M1/1‑62 (MQ=255) gAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaaca < 1:281474‑M1/101‑40 (MQ=255) aaaCTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacag > 2:603987‑M1/1‑61 (MQ=255) aaCTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagc > 2:345844‑M1/1‑60 (MQ=255) aCTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagca > 2:1057796‑M1/1‑59 (MQ=255) ctGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcg > 1:1180872‑M1/1‑56 (MQ=255) ctGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcg < 1:1233223‑M1/101‑46 (MQ=255) tGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgc > 2:694234‑M1/1‑55 (MQ=255) tGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgc > 2:347832‑M1/1‑55 (MQ=255) tGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgc > 2:182551‑M1/1‑55 (MQ=255) ggAAGAGGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcg < 2:1163892‑M1/101‑48 (MQ=255) aGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacg > 2:888518‑M1/1‑51 (MQ=255) gATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgt > 1:992047‑M1/1‑50 (MQ=255) tGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgtta < 1:99863‑M1/101‑54 (MQ=255) cAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatc < 1:1404337‑M1/101‑56 (MQ=255) gTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgc > 2:1112711‑M1/1‑44 (MQ=255) gTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgc > 1:181939‑M1/1‑44 (MQ=255) ttAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgct < 1:1308811‑M1/101‑59 (MQ=255) aGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgt < 1:740696‑M1/101‑62 (MQ=255) cATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtac < 1:847168‑M1/101‑64 (MQ=255) cGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtaccttt > 1:1304606‑M1/1‑34 (MQ=255) cGGAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtaccttt > 2:391663‑M1/1‑34 (MQ=255) ngaAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtaccttta > 1:337471‑M1/2‑33 (MQ=255) ggAAAAATATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtaccttta < 2:14321‑M1/101‑69 (MQ=255) aaaaaTATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttact < 2:1668059‑M1/101‑71 (MQ=255) aaaaaTATCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttact > 2:1505427‑M1/1‑31 (MQ=255) tatCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaag < 1:130183‑M1/101‑76 (MQ=255) tatCCGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaag > 1:1505460‑M1/1‑26 (MQ=255) cGCAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctg < 2:1346148‑M1/101‑80 (MQ=255) cAGCTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgta > 1:1290760‑M1/1‑20 (MQ=255) cTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaagg > 2:145397‑M1/1‑17 (MQ=255) cTGACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaagg < 1:1057801‑M1/101‑85 (MQ=255) gACCATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggct > 1:993439‑M1/1‑15 (MQ=255) ccATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggctta > 1:360669‑M1/1‑13 (MQ=255) cATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaa < 2:523630‑M1/101‑90 (MQ=255) cATCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaa < 2:1325257‑M1/101‑90 (MQ=255) aTCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaag < 2:181939‑M1/101‑91 (MQ=255) aTCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaag > 2:242995‑M1/1‑11 (MQ=255) tCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagt < 1:1667386‑M1/101‑92 (MQ=255) tCCGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagt < 1:218441‑M1/101‑92 (MQ=255) ccGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagta < 1:694239‑M1/101‑93 (MQ=255) cGTGTATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagtag < 2:787216‑M1/101‑94 (MQ=255) gtgtATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagtagc > 2:449050‑M1/1‑7 (MQ=255) tgtATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgaggttatcgctcgtacctttactgaaagcctgtaaggcttaagtagca > 1:839928‑M1/1‑6 (MQ=255) tgtATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagtagca < 2:1132009‑M1/101‑96 (MQ=255) gtATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagtagcaa > 1:82026‑M1/1‑5 (MQ=255) tATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagtagcaag < 1:72581‑M1/101‑98 (MQ=255) tATCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagtagcaag > 2:1189440‑M1/1‑4 (MQ=255) aTCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagtagcaagt > 1:699208‑M1/1‑3 (MQ=255) tCcggttatgcagttcgctttaactctctgactccggaacagcagcgcgacgttatcgctcgtacctttactgaaagcctgtaaggcttaagtagcaagtt < 1:710‑M1/101‑100 (MQ=255) | AAGGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 148/9805‑9904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |