New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 146 = 101760 (0.000)27 (0.440) 17/186 3.1 54.5% intergenic (–/–) –/– –/–
?54 18442 = 45 (0.730)intergenic (–/–) –/– –/–
Rejected: Coverage evenness skew score above cutoff.

CGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑  >  146/10076‑10176
                                                                                                    |         
cGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgg           >  1:1355047/1‑101 (MQ=255)
 gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgga          >  1:313636/1‑100 (MQ=255)
 gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgga          >  1:1152124/1‑100 (MQ=255)
 gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgga          >  1:218184/1‑100 (MQ=255)
  tGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggat         <  1:107242/101‑3 (MQ=255)
    aaaTCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgc       <  2:1611020/101‑5 (MQ=255)
       tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgcggc    <  1:936977/101‑8 (MQ=255)
       tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgcggc    <  2:1538911/101‑8 (MQ=255)
        cGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgcggcg   <  2:1358902/101‑9 (MQ=255)
         gagaAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgcggcgt  >  1:1343175/1‑92 (MQ=255)
                                                                                                    |         
CGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑  >  146/10076‑10176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.