New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 111 | 1 = | 0 (0.000) | 22 (0.330) | 18/200 | 2.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 224 | = 660 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAAAC > 111/1‑44 | gaatcgcagcggtgaagagacggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgg < 1:1472240‑M1/1‑1 (MQ=255) gcggtgaagagacggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCg > 2:763283‑M1/93‑101 (MQ=255) tgaagagacggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGcccc < 2:208537‑M1/13‑1 (MQ=255) aagagacggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCtt < 2:835870‑M1/15‑1 (MQ=255) agacggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCTCCTCGCCCCTTTgg < 1:130157‑M1/18‑1 (MQ=255) agacggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTgg > 1:659276‑M1/84‑101 (MQ=255) gacggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTggg > 1:621421‑M1/83‑101 (MQ=255) cggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGga < 2:51232‑M1/21‑1 (MQ=255) ggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGgag > 2:729650‑M1/80‑101 (MQ=255) ggtgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGgag > 2:1211051‑M1/80‑101 (MQ=255) tgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGagag > 1:84685‑M1/78‑101 (MQ=255) tgctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGagag > 1:1658651‑M1/78‑101 (MQ=255) gctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAgg > 1:609160‑M1/77‑101 (MQ=255) ctgcggattttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAggg < 1:1292060‑M1/26‑1 (MQ=255) attttgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCACGCCCCTTTGGGGAGAGGGTTAggg < 1:686360‑M1/32‑1 (MQ=255) tgcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg > 2:938982‑M1/66‑101 (MQ=255) gcgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgg < 1:1287435‑M1/37‑1 (MQ=255) cgtgagagtattgccagtatttaatgctggctagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg < 1:1379350‑M1/38‑1 (MQ=255) cgtgagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg < 1:1403916‑M1/38‑1 (MQ=255) gagagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa < 2:217378‑M1/41‑1 (MQ=255) agagtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGgaac > 1:548677‑M1/60‑100 (MQ=255) agtattgccagtatttaatgctggatagcaccgtcaagctaaattccgtactgaacgGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGgggaacgt < 2:949555‑M1/44‑4 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAAAC > 111/1‑44 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |