| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 100 | = 16396 | 0 (0.000) | 49 (0.740) +C |
36/198 | 0.8 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 64 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GGCTCAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 100/16297‑16396 | ggCTCAATCTTCAATGTTGGCTCGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGTTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCCCAc < 2:1086309‑M1/101‑2 (MQ=255)ggCTCAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAc > 1:840331‑M1/1‑100 (MQ=255) gCTCAATCTTAAATTTTGGCCCGCTTTCCCCCCCGCCCTTTCGGGGAGGGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAcc < 2:285001‑M1/101‑3 (MQ=255) cTCAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTTAccc > 1:133951‑M1/1‑98 (MQ=255) cactttgctatgttggcacGCTTTCCCCCCCGCCTTTCCGGGGAGAGGGCGGGGGTGAGGGAAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAcccta < 2:1151024‑M1/92‑6 (MQ=255) cAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAcccta < 2:166554‑M1/101‑6 (MQ=255) aTCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaac < 1:869796‑M1/101‑8 (MQ=255) cAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctct < 2:451354‑M1/101‑13 (MQ=255) aTGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctcc < 2:254516‑M1/101‑15 (MQ=255) aTGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctcc < 1:1203300‑M1/101‑15 (MQ=255) tGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccc < 2:1311864‑M1/101‑16 (MQ=255) cACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaagg < 1:159487‑M1/101‑22 (MQ=255) cACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaagg < 1:982165‑M1/101‑22 (MQ=255) aCGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggg < 1:983911‑M1/101‑23 (MQ=255) gCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggt < 2:459215‑M1/101‑25 (MQ=255) ttttCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTTCCCTCAcccccaccccctccccccacgggggg > 1:99038‑M1/1‑75 (MQ=255) ttttCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtga < 1:1427051‑M1/101‑27 (MQ=255) tttCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgcg > 2:825491‑M1/1‑74 (MQ=255) tCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggg < 2:668889‑M1/101‑30 (MQ=255) tttCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgag < 1:1673239‑M1/101‑41 (MQ=255) tttCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgag < 1:612142‑M1/101‑41 (MQ=255) gagaGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgctttt < 1:159028‑M1/101‑48 (MQ=255) gagGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgt < 1:233717‑M1/101‑50 (MQ=255) gggCCGGGGCGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtac < 2:875456‑M1/101‑52 (MQ=255) cGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttg < 1:584444‑M1/101‑56 (MQ=255) ggggggAGGGTAAATATTCGCGCCAGTGCCATCCTGTTCCCCCCAccctagccctcaccccaaaggggtgaggggactgtctgagcgcttttgtactttgt < 2:1234562‑M1/101‑57 (MQ=255) ggggTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgt < 2:914695‑M1/101‑57 (MQ=255) ggggTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgt < 1:39747‑M1/101‑57 (MQ=255) ggTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtca < 1:439573‑M1/101‑59 (MQ=255) gTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcat > 1:542407‑M1/1‑42 (MQ=255) gAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatct < 2:1380332‑M1/101‑62 (MQ=255) gTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctcccccaaggggggaggggactgtctgagcgcttttgtactttgtcatctgact > 2:1121115‑M1/1‑36 (MQ=255) gTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggggaggggactgtctgagcgcttttgtactttgtcatctgact > 2:829874‑M1/1‑36 (MQ=255) cgcCAGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgcc < 1:735084‑M1/101‑77 (MQ=255) aGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaag < 2:1235406‑M1/101‑81 (MQ=255) aGTGCCGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaag < 1:732807‑M1/101‑81 (MQ=255) cGGCCTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcct < 2:290200‑M1/101‑86 (MQ=255) ggCCTGTTCCCCTCAccctaaccctctccctaaaggggtgaggggactgtctgagcgcttttgtactttgtcatcttactaaaaaggcgccgaagcgcctt > 1:1158438‑M1/1‑15 (MQ=255) ccTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgccttta < 2:1237298‑M1/101‑89 (MQ=255) cTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttag < 2:1372508‑M1/101‑90 (MQ=255) cTGTTCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttag < 1:813516‑M1/101‑90 (MQ=255) ttCCCCTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaag < 2:724598‑M1/101‑93 (MQ=255) ccccTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagat < 2:453521‑M1/101‑95 (MQ=255) ccccTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagat < 1:825496‑M1/101‑95 (MQ=255) cccTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagata > 2:1272813‑M1/1‑6 (MQ=255) ccTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagatag < 2:584421‑M1/101‑97 (MQ=255) ccTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagatag > 2:94116‑M1/1‑5 (MQ=255) cTCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagatagt > 1:1185894‑M1/1‑4 (MQ=255) tCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagatagtc < 2:1625802‑M1/101‑99 (MQ=255) tCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagatagtc < 2:1323171‑M1/101‑99 (MQ=255) tCAccctaaccctctccccaaaggggtgaggggactgtctgagcgcttttgtactttgtcatctgactaaaaaggcgccgaagcgcctttagaagatagtc < 2:651639‑M1/101‑99 (MQ=255) | GGCTCAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 100/16297‑16396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |