| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 84 | = 19746 | 0 (0.000) | 35 (0.610) +CTGGCACATTTTGC |
21/172 | -0.0 | 75.1% | intergenic (–/–) | –/– | –/– |
| ? | 92 | = 38 | 27 (0.410) | intergenic (–/–) | –/– | –/– | |||||
TACTCCGGTGCTGGCGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 84/19648‑19746‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT‑‑‑‑‑‑‑‑T < 92/38‑1 |||||||||||||| TACTCCGGTGCTGGCGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCT < 1:925309/101‑1TACTCCGGTGCTGGCGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCT < 1:1170003/101‑1 CTCNNGTGCTGGCNNNNNNNCNGGGGTAGGTTNTAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACNCCTTATCCGCCCTACGCGGTTCTGn < 2:473404/101‑2 CTCCGGTGCTGTCGAAGCCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTATGCGGTTCTGG < 2:1561293/101‑1 CTCCGGTGCTGGCGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGG < 1:1280623/101‑1 GGTGCTGGCGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACA < 2:972028/101‑1 GGTGCTGGCGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACA > 1:1030348/1‑101 GCGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCA < 2:359267/101‑1 CGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAG > 2:856828/1‑101 CGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAG < 1:105685/101‑1 CGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAG > 2:729209/1‑101 GAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGG > 2:1088250/1‑101 CCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTG < 1:1450237/101‑1 TAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGC > 1:1285598/1‑101 TAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGC > 2:1492964/1‑101 AGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCG > 1:1035380/1‑101 TTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCA > 2:753719/1‑101 TATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTAATAAGACGCGGCAA > 1:1068997/1‑101 ATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAG < 1:1157485/101‑1 AGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCG > 2:1667254/1‑101 GTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGT > 2:1535182/1‑101 TCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGC > 2:855093/1‑101 CGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCA < 2:1040900/101‑1 gcatcggagcACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA‑‑CGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCA > 2:1255089/11‑101 gcatcggagcACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA‑‑CGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCA < 2:1691447/91‑1 catcggagcACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA‑‑CGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAG > 2:1462086/10‑101 atcggagcACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA‑‑CGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGG > 1:1495858/9‑101 atcggagcACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA‑‑CGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGG > 1:57444/9‑101 TGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCA < 2:860507/101‑1 TGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCA < 2:1049628/101‑1 GCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAG > 1:1110701/1‑101 CTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGG < 1:325164/101‑1 ggagcACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA‑‑CGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT < 1:953852/96‑1 CATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCA < 2:716919/101‑1 ATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT > 2:238392/1‑101 TTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATcggag < 2:28652/101‑6 TTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATcggag < 2:1175941/101‑6 TTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATcggag > 2:868482/1‑96 ATTGCCGGATGGGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATcggagca > 2:323288/1‑94 ATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATcggagca < 2:1473584/101‑8 ATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATcggagca > 2:926092/1‑94 TGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTTCTGGCACATTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATcggagcact > 2:1442819/1‑92 |||||||||||||| TACTCCGGTGCTGGCGAAACCACTGGGGTAGGTTATAGTCTCGGTGCTCATTACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 84/19648‑19746‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT‑‑‑‑‑‑‑‑T < 92/38‑1 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |