New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 64 | = 23955 | 0 (0.000) | 25 (0.380) | 19/198 | 3.0 | 37.0% | intergenic (–/–) | –/– | –/– |
? | 91 | = 8411 | 85 (1.290) | intergenic (–/–) | –/– | –/– | |||||
Rejected: Coverage evenness skew score above cutoff. |
ACAGATTTCTCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 64/23855‑23955 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGAT‑T‑GCGTAGGCCTGATAAGCGTAGCGCATCA < 91/8411‑8330 ACAGATTTCTCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCG > 1:1676394/1‑101 ATTTCTCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAA > 2:1109643/1‑101 ATTTCTCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAA < 2:848471/101‑1 TTTCTCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAAC < 2:814701/101‑1 TTTCTCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAAC < 1:1163043/101‑1 CTCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCC > 2:1547096/1‑101 TCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCT < 2:799440/101‑1 ATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTA > 1:1074373/1‑101 AATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGG > 2:521755/1‑101 AATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGG > 2:1128752/1‑101 TCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCC > 2:700223/1‑101 CACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCT < 1:73107/101‑1 CCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC < 2:94909/101‑1 CCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC > 2:94848/1‑101 TTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAA > 2:411503/1‑101 TTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCCGCCTACAA > 2:1697149/1‑101 TGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAA > 1:1626281/1‑101 CTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAa < 1:1560285/101‑2 TTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAac > 1:44041/1‑99 GCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAacctgca < 1:358293/101‑8 GCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAacctgca < 1:1294459/101‑8 TGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAG‑GATAC‑GTGTAGGCCTGATAAGCGTAG < 2:963604/101‑1 CGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAG‑GAT‑ACGTGTAGGCCTGATAAGCGTAGCG < 2:1676388/101‑1 CTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAG‑GATAC‑GTGTAGGCCTGATAAGCGTAGCGCA > 1:151886/1‑101 TGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAG‑GATAC‑GTGTAGGCCTGATAAGCGTAGCGCATCA > 1:393762/1‑101 TGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAG‑GAT‑ACGTGTAGGCCTGATAAGCGTAGCGCATCA < 2:832866/101‑1 ACAGATTTCTCATCTGAATCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 64/23855‑23955 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGAT‑T‑GCGTAGGCCTGATAAGCGTAGCGCATCA < 91/8411‑8330 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |